Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.L35.3.v1.A.SL2-1

Possible name(s)

ADAMTSL3; FCRL3; NECTIN3

Gene model

KH2012:KH.L35.3

Location

KhL35 [36,320 / 39,831]

Sequences

Amino acid sequence

Length: 183

>KH.L35.3.v1.A.SL2-1
VCLVMLFMEVAPTLLNLLPWLMKQVRIPNLLVDGVSLTATSIIRNITQSLSIICETSNQV
QSSTFTWLKDGRLRSSSACLVLYNISSTDAGLYSCNTTNDFGNFSSSLYLNVHTPLVFTT
VQTTVPTTGATPPPIPPPDNLGVIIGAAVGGVVAFILIIILVYRLFIEPNKGKQIDKVTS
QDM

Nucleotide sequence

Length: 1,756

>KH2012:KH.L35.3.v1.A.SL2-1
TATGTCACTATAATCCTACTCATAAGTATGTTTAGTTATGTTGTTTATGGAGGTGGCACC
AACATTACTCAACCTACTACCGTGGTTAATGAAACAAGTAAGAATTCCCAATCTATTGGT
TGATGGAGTTTCATTAACAGCTACTTCCATTATAAGAAACATCACACAAAGTTTGAGCAT
AATCTGTGAAACATCGAATCAAGTACAATCTTCCACATTTACATGGTTAAAGGATGGAAG
ATTGAGATCTTCTTCAGCATGTCTTGTACTTTACAATATATCCTCCACAGATGCTGGCTT
GTATTCTTGCAATACAACCAATGATTTTGGAAACTTTTCCTCATCTTTATACCTTAATGT
ACATACTCCGTTGGTATTTACAACAGTACAAACAACAGTTCCCACAACTGGTGCTACACC
ACCACCCATCCCACCACCAGATAACTTGGGTGTTATAATTGGAGCTGCAGTTGGTGGGGT
GGTGGCTTTTATATTGATCATCATTCTTGTTTATCGACTTTTTATTGAACCAAACAAAGG
AAAACAAATTGATAAAGTGACTTCCCAAGACATGTAAGTAAAATATATTTCCCTGATTTT
CATTCAGTATTTACCAATATGTTTCTTAGCAATACATACCCAGCTGGTTATGGTAAGATA
ATAATTTTTCATTTCATTGATTAACTGAAACAATCAAACACCTCATGCTCATGGTAAACA
TTGAAAAGAAAATTTTGCCTACTTTTTGTTTCATTTATCAAATCTTTCAGTTTATTACCA
ATCTTTATTTAAATATTTACTTTACTTTCTAGGTTTTATAATATATATCGTTTGTCTTAA
TAATTACATTGTTATTGTGTATTTTGTAGAATATGCTGGCATCAATCTTCCTAATGAAGT
TACTTACCAGAACTTGAACCGAGCAGATATCATTGATCCAAGCTCAACAAATTATGAAAA
CATGAGAAACAACGTATCAGTTAAACGAGTTGAAGAAGGTTATGTTGAACTGAAACATCG
GGATCCTCATGGACAGGTTGTAACCAGTGGTGAGAATGGTGGGTATGAAACAGCTGTGGT
TAGAGTGGACAAGGAACCAGAATACACAAGTATGACATCACTTCCTGCACCTTATGATCA
AATCCAATAAAACTTCACAACACTAATTAATGTCACTAATTATGTTGTTGCGAACCAAAT
CAAAAACTAGATATTCACAAAGACACATGTGTGGTATAGCTGGTAAACAGCCATGAGGTG
AATGAACAAAACAGCTTTGTTATAACTTTTAAAATTGGCTTGCTTTGTGAAGATAGGTTA
GTTATTAAGCGTTTGTGTTAACTATACTAAGGCATTGCCATTATGTAATATTAGCTTGCT
GCATCTATTGTGCATAACCATGCAAAATATTTCCTTCTGTGGGAAGTGATGAAGTCAGAT
GTTGATTAATGACTTTAGGAAGTAGGGGAATTATCTAAACTAAGTTTGATTTGGTACTCA
GAATTTTTAAGGAAGTTCCTGTTATGTCCTAAGGTATATTATAGATATAAAAACGAAATT
TATTTGTGTTTTGTTTTAGTGAGACTGTTTTAGTATTTACCTGTTACCACTTTGTATTAT
TGCTTCAACTTCAACTTAAAATAAGTATTTTGTATGGTTGATCAAACGTAAAATCTAAAT
TACTTTTGATATTATATACTACATAGAATTAGTGTATAATTTTCAATACACTGCATGCCG
TCTTAAAGCTGATGAT

InterProScan

ProSiteProfiles	Ig-like_dom (IPR007110) - T[28-111] 10.753
PANTHER	Myelin_P0-rel (IPR000920) - T[37-106] 3.3E-47 - T[107-182] 3.3E-47
SMART	Ig_sub (IPR003599) - T[39-113] 4.4E-6
Gene3D	Ig-like_fold (IPR013783) - T[40-116] 2.0E-10
SUPERFAMILY	Ig-like_dom_sf (IPR036179) - T[41-116] 2.93E-12
Pfam	Ig-like_dom (IPR007110) - T[45-112] 1.2E-6
SMART	Ig_sub2 (IPR003598) - T[45-102] 0.0022

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value