- Transcript 'KH2012:KH.L37.5.v5.A...' >
- Transcript 'KH2012:KH.L37.5.v1.A...' >
- Transcript 'KH2012:KH.L42.6.v1.A...' >
- Transcript 'Cisavi.CG.ENS81.R283...' >
- Transcript 'KH2012:KH.L37.5.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.L37.5.v1.A.SL1-1
Possible name(s)
ACTN1; ACTN4; DIXDC1
Gene model
Location
KhL37 [27,084 / 31,942]
Amino acid sequence
Length: 310
>KH.L37.5.v1.A.SL1-1
WLAMSVKVKYITQEQVQAYTAWVNSQLKKRGKNIVNLGEDLKDGVALVAVVEIVSGHTLG
GIKPTCENEKRENVLKVLQFMRNAGIKLHHVSVDEITSGNVKTIMQLILALAAHFKPASI
GGRKVESPRQRNEVSLRIKQRWRDSRVKESIGKPGMESSMQADVEKELAAIRDITQCLQK
VEENHIARQENRKLTSEKSALEQRFLQQEEELLSIRQQLLQSNLSRDKLQSEKAELIAEL
TETRRNQDELRTKCRDHERTLERMENEAIQNKINHSREIRKLDKEIHLARQESYNGQIND
SVFHDKPFIG
Nucleotide sequence
Length: 1,701
>KH2012:KH.L37.5.v1.A.SL1-1
TTTGTATAATAAAACCATTTGCTGTGTTGCATAGATTGTTGATTATAACTAATGGTTAGC
AATGAGTGTGAAAGTAAAATACATCACTCAGGAACAAGTACAAGCATACACAGCTTGGGT
TAACAGCCAGTTGAAGAAGAGAGGGAAAAATATTGTTAACCTTGGTGAAGATTTGAAAGA
TGGGGTGGCTTTGGTTGCGGTTGTGGAAATAGTTTCCGGCCATACATTGGGGGGGATTAA
ACCAACATGCGAGAACGAAAAGCGAGAAAATGTTTTAAAAGTTTTGCAGTTTATGAGAAA
TGCTGGGATTAAACTACATCATGTTTCAGTTGACGAGATAACGAGCGGTAATGTTAAAAC
CATCATGCAACTTATATTAGCGCTTGCTGCCCATTTTAAACCAGCCAGTATTGGTGGAAG
AAAAGTTGAATCGCCTCGCCAACGTAATGAAGTTTCATTGAGGATCAAACAAAGATGGAG
GGATAGCAGGGTGAAAGAATCTATCGGGAAACCTGGCATGGAATCGTCCATGCAAGCCGA
TGTAGAGAAAGAACTTGCCGCGATTCGTGATATAACTCAATGTCTACAGAAAGTGGAGGA
AAACCACATCGCACGACAAGAAAATCGCAAACTAACATCGGAGAAGTCGGCGCTTGAACA
AAGATTCCTCCAACAAGAAGAAGAACTTTTATCGATCCGACAACAACTGTTGCAAAGCAA
TCTATCGAGGGATAAACTACAATCCGAGAAGGCTGAATTAATAGCGGAACTCACGGAAAC
CCGACGTAACCAAGATGAACTTCGAACAAAATGTCGCGACCACGAGCGAACCTTGGAACG
AATGGAGAACGAAGCGATTCAGAACAAAATAAACCACTCACGAGAAATACGAAAGTTGGA
CAAAGAAATTCACTTGGCACGTCAGGAATCATATAATGGTCAAATCAACGACAGTGTGTT
CCATGACAAACCATTCATCGGGTAAGTTTCCAATCAATTGTTTAATATGAAAAAAATATA
GAAATATATGTTCAAAACTTACAAAAAATTAGGAATTTGTAAACAAACCCATTTTTTCTA
GTTCCCCAAATGGGAAATCCCCTGGTTCCCCCTTTCTCAATAGATCGAAAGGGTCCCCAT
TATTAGGGAGATCCCCCACCCCCAATACTCCGGGTTCACCAATATTATCACGAAGGTCGC
CTTTATCACGAAATCATCCATCACGCAGAAGGAAAACCATGGAGAACCACGTGACCCGCG
TTCTTTACTTCACGGATAGAGACATGACGCCGTGTATGACGTCAATATCGAAACGAGTCG
GTGATATAACGCTGGGCGAATTCAAGACGGTGATAAAGAAGGAAGGAAATTATCGGTTTA
TTTTCAAAGCTCTTGATCCAGAACTTGGTACAGTGAAGGAAGAGGTGTTTCACGATGATG
ACGTCATCCCGGGATGGGAGGGGAAGATTGTGGCATGGGTTGAGGAGGTTTTGCGGGTGT
GATGACGTAAAACATATGTCATAGTTTTTCTTCCAAGTCTTCCTGGGTGCTAAATTGTTT
CAGCCACGTCACCTCAACGGATTTTAACGAATTATGACGTCACCGTGACGTCATCACTGT
GCGATCGGTGCAATTGTGTATAAAGTGCACTTATCGTTGTTGCCATAGTTCTTCAATAAA
AAAAACGTTTTAATCATAGAA
| Gene3D |
CH_dom_sf (IPR036872) - T[5-121] 8.9E-29 |
| PANTHER |
Dsh/Dvl-rel (IPR015506) - T[10-134] 2.2E-85 - T[175-287] 2.2E-85 |
| ProSiteProfiles |
CH-domain (IPR001715) - T[13-116] 13.442 |
| SUPERFAMILY |
CH_dom_sf (IPR036872) - T[13-116] 7.2E-23 |
| Pfam |
CH-domain (IPR001715) - T[14-116] 5.5E-15 |
| SMART |
CH-domain (IPR001715) - T[15-114] 4.5E-10 |
| ProSitePatterns |
Actinin_actin-bd_CS (IPR001589) - T[15-24] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DIXC1_HUMAN | 46.875 % | 115 | 1.06E-28 |