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TRANSCRIPT CARD

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  1. Clone 'ma152n23' > 
  2. Transcript 'Cisavi.CG.ENS81.R0.1...' > 
  3. Transcript 'Boschl.CG.Botznik201...' > 
  4. Transcript 'KH2012:KH.L37.5.v2.A...' > 
  5. Transcript 'KH2012:KH.L37.5.v3.A...'

Transcript Model

Transcript Id

KH2012:KH.L37.5.v3.A.SL4-1

Possible name(s)

ACTN1; ACTN4; DIXDC1

Gene model

KH2012:KH.L37.5

Location

KhL37 [27,084 / 32,287]

Sequences

Amino acid sequence

Length: 315

>KH.L37.5.v3.A.SL4-1
SSNPRFHPRFIKWSMEIQEQVQAYTAWVNSQLKKRGKNIVNLGEDLKDGVALVAVVEIVS
GHTLGGIKPTCENEKRENVLKVLQFMRNAGIKLHHVSVDEITSGNVKTIMQLILALAAHF
KPASIGGRKVESPRQRNEVSLRIKQRWRDSRVKESIGKPGMESSMQADVEKELAAIRDIT
QCLQKVEENHIARQENRKLTSEKSALEQRFLQQEEELLSIRQQLLQSNLSRDKLQSEKAE
LIAELTETRRNQDELRTKCRDHERTLERMENEAIQNKINHSREIRKLDKEIHLARQESYN
GQINDSVFHDKPFIG

Nucleotide sequence

Length: 1,715

>KH2012:KH.L37.5.v3.A.SL4-1
TAGGGAGTCGGTGTTAGCTTTATCTGCGTTTATTGTTAACCAGCCTTCTAAAGTTCAAAT
CCGAGATTCCACCCCCGTTTTATAAAGTGGTCAATGGAAATACAGGAACAAGTACAAGCA
TACACAGCTTGGGTTAACAGCCAGTTGAAGAAGAGAGGGAAAAATATTGTTAACCTTGGT
GAAGATTTGAAAGATGGGGTGGCTTTGGTTGCGGTTGTGGAAATAGTTTCCGGCCATACA
TTGGGGGGGATTAAACCAACATGCGAGAACGAAAAGCGAGAAAATGTTTTAAAAGTTTTG
CAGTTTATGAGAAATGCTGGGATTAAACTACATCATGTTTCAGTTGACGAGATAACGAGC
GGTAATGTTAAAACCATCATGCAACTTATATTAGCGCTTGCTGCCCATTTTAAACCAGCC
AGTATTGGTGGAAGAAAAGTTGAATCGCCTCGCCAACGTAATGAAGTTTCATTGAGGATC
AAACAAAGATGGAGGGATAGCAGGGTGAAAGAATCTATCGGGAAACCTGGCATGGAATCG
TCCATGCAAGCCGATGTAGAGAAAGAACTTGCCGCGATTCGTGATATAACTCAATGTCTA
CAGAAAGTGGAGGAAAACCACATCGCACGACAAGAAAATCGCAAACTAACATCGGAGAAG
TCGGCGCTTGAACAAAGATTCCTCCAACAAGAAGAAGAACTTTTATCGATCCGACAACAA
CTGTTGCAAAGCAATCTATCGAGGGATAAACTACAATCCGAGAAGGCTGAATTAATAGCG
GAACTCACGGAAACCCGACGTAACCAAGATGAACTTCGAACAAAATGTCGCGACCACGAG
CGAACCTTGGAACGAATGGAGAACGAAGCGATTCAGAACAAAATAAACCACTCACGAGAA
ATACGAAAGTTGGACAAAGAAATTCACTTGGCACGTCAGGAATCATATAATGGTCAAATC
AACGACAGTGTGTTCCATGACAAACCATTCATCGGGTAAGTTTCCAATCAATTGTTTAAT
ATGAAAAAAATATAGAAATATATGTTCAAAACTTACAAAAAATTAGGAATTTGTAAACAA
ACCCATTTTTTCTAGTTCCCCAAATGGGAAATCCCCTGGTTCCCCCTTTCTCAATAGATC
GAAAGGGTCCCCATTATTAGGGAGATCCCCCACCCCCAATACTCCGGGTTCACCAATATT
ATCACGAAGGTCGCCTTTATCACGAAATCATCCATCACGCAGAAGGAAAACCATGGAGAA
CCACGTGACCCGCGTTCTTTACTTCACGGATAGAGACATGACGCCGTGTATGACGTCAAT
ATCGAAACGAGTCGGTGATATAACGCTGGGCGAATTCAAGACGGTGATAAAGAAGGAAGG
AAATTATCGGTTTATTTTCAAAGCTCTTGATCCAGAACTTGGTACAGTGAAGGAAGAGGT
GTTTCACGATGATGACGTCATCCCGGGATGGGAGGGGAAGATTGTGGCATGGGTTGAGGA
GGTTTTGCGGGTGTGATGACGTAAAACATATGTCATAGTTTTTCTTCCAAGTCTTCCTGG
GTGCTAAATTGTTTCAGCCACGTCACCTCAACGGATTTTAACGAATTATGACGTCACCGT
GACGTCATCACTGTGCGATCGGTGCAATTGTGTATAAAGTGCACTTATCGTTGTTGCCAT
AGTTCTTCAATAAAAAAAACGTTTTAATCATAGAA

InterProScan

Gene3D
CH_dom_sf (IPR036872) - T[12-126] 9.5E-29
PANTHER
Dsh/Dvl-rel (IPR015506) - T[14-139] 1.2E-85 - T[180-292] 1.2E-85
SUPERFAMILY
CH_dom_sf (IPR036872) - T[18-121] 8.12E-23
ProSiteProfiles
CH-domain (IPR001715) - T[18-121] 13.442
Pfam
CH-domain (IPR001715) - T[19-121] 5.6E-15
SMART
CH-domain (IPR001715) - T[20-119] 4.5E-10
ProSitePatterns
Actinin_actin-bd_CS (IPR001589) - T[20-29] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DIXC1_HUMAN 47.619 % 115 1.64E-28