- Transcript 'KH2012:KH.L37.5.v3.A...'
Transcript Model
Transcript Id
KH2012:KH.L37.5.v3.A.SL5-1
Possible name(s)
ACTN1; ACTN4; DIXDC1
Gene model
Location
KhL37 [27,084 / 32,291]
Amino acid sequence
Length: 315
>KH.L37.5.v3.A.SL5-1
SSNPRFHPRFIKWSMEIQEQVQAYTAWVNSQLKKRGKNIVNLGEDLKDGVALVAVVEIVS
GHTLGGIKPTCENEKRENVLKVLQFMRNAGIKLHHVSVDEITSGNVKTIMQLILALAAHF
KPASIGGRKVESPRQRNEVSLRIKQRWRDSRVKESIGKPGMESSMQADVEKELAAIRDIT
QCLQKVEENHIARQENRKLTSEKSALEQRFLQQEEELLSIRQQLLQSNLSRDKLQSEKAE
LIAELTETRRNQDELRTKCRDHERTLERMENEAIQNKINHSREIRKLDKEIHLARQESYN
GQINDSVFHDKPFIG
Nucleotide sequence
Length: 1,719
>KH2012:KH.L37.5.v3.A.SL5-1
ACAGTAGGGAGTCGGTGTTAGCTTTATCTGCGTTTATTGTTAACCAGCCTTCTAAAGTTC
AAATCCGAGATTCCACCCCCGTTTTATAAAGTGGTCAATGGAAATACAGGAACAAGTACA
AGCATACACAGCTTGGGTTAACAGCCAGTTGAAGAAGAGAGGGAAAAATATTGTTAACCT
TGGTGAAGATTTGAAAGATGGGGTGGCTTTGGTTGCGGTTGTGGAAATAGTTTCCGGCCA
TACATTGGGGGGGATTAAACCAACATGCGAGAACGAAAAGCGAGAAAATGTTTTAAAAGT
TTTGCAGTTTATGAGAAATGCTGGGATTAAACTACATCATGTTTCAGTTGACGAGATAAC
GAGCGGTAATGTTAAAACCATCATGCAACTTATATTAGCGCTTGCTGCCCATTTTAAACC
AGCCAGTATTGGTGGAAGAAAAGTTGAATCGCCTCGCCAACGTAATGAAGTTTCATTGAG
GATCAAACAAAGATGGAGGGATAGCAGGGTGAAAGAATCTATCGGGAAACCTGGCATGGA
ATCGTCCATGCAAGCCGATGTAGAGAAAGAACTTGCCGCGATTCGTGATATAACTCAATG
TCTACAGAAAGTGGAGGAAAACCACATCGCACGACAAGAAAATCGCAAACTAACATCGGA
GAAGTCGGCGCTTGAACAAAGATTCCTCCAACAAGAAGAAGAACTTTTATCGATCCGACA
ACAACTGTTGCAAAGCAATCTATCGAGGGATAAACTACAATCCGAGAAGGCTGAATTAAT
AGCGGAACTCACGGAAACCCGACGTAACCAAGATGAACTTCGAACAAAATGTCGCGACCA
CGAGCGAACCTTGGAACGAATGGAGAACGAAGCGATTCAGAACAAAATAAACCACTCACG
AGAAATACGAAAGTTGGACAAAGAAATTCACTTGGCACGTCAGGAATCATATAATGGTCA
AATCAACGACAGTGTGTTCCATGACAAACCATTCATCGGGTAAGTTTCCAATCAATTGTT
TAATATGAAAAAAATATAGAAATATATGTTCAAAACTTACAAAAAATTAGGAATTTGTAA
ACAAACCCATTTTTTCTAGTTCCCCAAATGGGAAATCCCCTGGTTCCCCCTTTCTCAATA
GATCGAAAGGGTCCCCATTATTAGGGAGATCCCCCACCCCCAATACTCCGGGTTCACCAA
TATTATCACGAAGGTCGCCTTTATCACGAAATCATCCATCACGCAGAAGGAAAACCATGG
AGAACCACGTGACCCGCGTTCTTTACTTCACGGATAGAGACATGACGCCGTGTATGACGT
CAATATCGAAACGAGTCGGTGATATAACGCTGGGCGAATTCAAGACGGTGATAAAGAAGG
AAGGAAATTATCGGTTTATTTTCAAAGCTCTTGATCCAGAACTTGGTACAGTGAAGGAAG
AGGTGTTTCACGATGATGACGTCATCCCGGGATGGGAGGGGAAGATTGTGGCATGGGTTG
AGGAGGTTTTGCGGGTGTGATGACGTAAAACATATGTCATAGTTTTTCTTCCAAGTCTTC
CTGGGTGCTAAATTGTTTCAGCCACGTCACCTCAACGGATTTTAACGAATTATGACGTCA
CCGTGACGTCATCACTGTGCGATCGGTGCAATTGTGTATAAAGTGCACTTATCGTTGTTG
CCATAGTTCTTCAATAAAAAAAACGTTTTAATCATAGAA
| Gene3D |
CH_dom_sf (IPR036872) - T[12-126] 9.5E-29 |
| PANTHER |
Dsh/Dvl-rel (IPR015506) - T[14-139] 1.2E-85 - T[180-292] 1.2E-85 |
| SUPERFAMILY |
CH_dom_sf (IPR036872) - T[18-121] 8.12E-23 |
| ProSiteProfiles |
CH-domain (IPR001715) - T[18-121] 13.442 |
| Pfam |
CH-domain (IPR001715) - T[19-121] 5.6E-15 |
| SMART |
CH-domain (IPR001715) - T[20-119] 4.5E-10 |
| ProSitePatterns |
Actinin_actin-bd_CS (IPR001589) - T[20-29] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DIXC1_HUMAN | 47.619 % | 115 | 1.64E-28 |