- Transcript 'KH2012:KH.L37.5.v3.A...' >
- Transcript 'KH2012:KH.L37.5.v4.A...' >
- Clone 'ma207p09' >
- Transcript 'KH2012:KH.C12.278.v1...' >
- Transcript 'KH2012:KH.L37.5.v4.A...'
Transcript Model
Transcript Id
KH2012:KH.L37.5.v4.A.SL4-1
Possible name(s)
ACTN1; ACTN4; DIXDC1
Gene model
Location
KhL37 [27,084 / 32,287]
Amino acid sequence
Length: 491
>KH.L37.5.v4.A.SL4-1
SSNPRFHPRFIKWSMEIQEQVQAYTAWVNSQLKKRGKNIVNLGEDLKDGVALVAVVEIVS
GHTLGGIKPTCENEKRENVLKVLQFMRNAGIKLHHVSVDEITSGNVKTIMQLILALAAHF
KPASIGGRKVESPRQRNEVSLRIKQRWRDSRVKESIGKPGMESSMQADVEKELAAIRDIT
QCLQKVLLEEIPGQPLEGHDADEQSVIIQARLDQAIVDKVNLEEENHIARQENRKLTSEK
SALEQRFLQQEEELLSIRQQLLQSNLSRDKLQSEKAELIAELTETRRNQDELRTKCRDHE
RTLERMENEAIQNKINHSREIRKLDKEIHLARQESYNGQINDSVFHDKPFIGSPNGKSPG
SPFLNRSKGSPLLGRSPTPNTPGSPILSRRSPLSRNHPSRRRKTMENHVTRVLYFTDRDM
TPCMTSISKRVGDITLGEFKTVIKKEGNYRFIFKALDPELGTVKEEVFHDDDVIPGWEGK
IVAWVEEVLRV
Nucleotide sequence
Length: 1,726
>KH2012:KH.L37.5.v4.A.SL4-1
TAGGGAGTCGGTGTTAGCTTTATCTGCGTTTATTGTTAACCAGCCTTCTAAAGTTCAAAT
CCGAGATTCCACCCCCGTTTTATAAAGTGGTCAATGGAAATACAGGAACAAGTACAAGCA
TACACAGCTTGGGTTAACAGCCAGTTGAAGAAGAGAGGGAAAAATATTGTTAACCTTGGT
GAAGATTTGAAAGATGGGGTGGCTTTGGTTGCGGTTGTGGAAATAGTTTCCGGCCATACA
TTGGGGGGGATTAAACCAACATGCGAGAACGAAAAGCGAGAAAATGTTTTAAAAGTTTTG
CAGTTTATGAGAAATGCTGGGATTAAACTACATCATGTTTCAGTTGACGAGATAACGAGC
GGTAATGTTAAAACCATCATGCAACTTATATTAGCGCTTGCTGCCCATTTTAAACCAGCC
AGTATTGGTGGAAGAAAAGTTGAATCGCCTCGCCAACGTAATGAAGTTTCATTGAGGATC
AAACAAAGATGGAGGGATAGCAGGGTGAAAGAATCTATCGGGAAACCTGGCATGGAATCG
TCCATGCAAGCCGATGTAGAGAAAGAACTTGCCGCGATTCGTGATATAACTCAATGTCTA
CAGAAAGTGCTACTCGAAGAAATACCTGGCCAACCACTTGAGGGACATGACGCAGATGAG
CAAAGTGTGATCATTCAAGCGCGACTCGATCAAGCTATTGTGGATAAAGTAAACTTGGAG
GAGGAAAACCACATCGCACGACAAGAAAATCGCAAACTAACATCGGAGAAGTCGGCGCTT
GAACAAAGATTCCTCCAACAAGAAGAAGAACTTTTATCGATCCGACAACAACTGTTGCAA
AGCAATCTATCGAGGGATAAACTACAATCCGAGAAGGCTGAATTAATAGCGGAACTCACG
GAAACCCGACGTAACCAAGATGAACTTCGAACAAAATGTCGCGACCACGAGCGAACCTTG
GAACGAATGGAGAACGAAGCGATTCAGAACAAAATAAACCACTCACGAGAAATACGAAAG
TTGGACAAAGAAATTCACTTGGCACGTCAGGAATCATATAATGGTCAAATCAACGACAGT
GTGTTCCATGACAAACCATTCATCGGTTCCCCAAATGGGAAATCCCCTGGTTCCCCCTTT
CTCAATAGATCGAAAGGGTCCCCATTATTAGGGAGATCCCCCACCCCCAATACTCCGGGT
TCACCAATATTATCACGAAGGTCGCCTTTATCACGAAATCATCCATCACGCAGAAGGAAA
ACCATGGAGAACCACGTGACCCGCGTTCTTTACTTCACGGATAGAGACATGACGCCGTGT
ATGACGTCAATATCGAAACGAGTCGGTGATATAACGCTGGGCGAATTCAAGACGGTGATA
AAGAAGGAAGGAAATTATCGGTTTATTTTCAAAGCTCTTGATCCAGAACTTGGTACAGTG
AAGGAAGAGGTGTTTCACGATGATGACGTCATCCCGGGATGGGAGGGGAAGATTGTGGCA
TGGGTTGAGGAGGTTTTGCGGGTGTGATGACGTAAAACATATGTCATAGTTTTTCTTCCA
AGTCTTCCTGGGTGCTAAATTGTTTCAGCCACGTCACCTCAACGGATTTTAACGAATTAT
GACGTCACCGTGACGTCATCACTGTGCGATCGGTGCAATTGTGTATAAAGTGCACTTATC
GTTGTTGCCATAGTTCTTCAATAAAAAAAACGTTTTAATCATAGAA
| Gene3D |
CH_dom_sf (IPR036872) - T[12-126] 2.2E-28 |
| PANTHER |
Dsh/Dvl-rel (IPR015506) - T[14-139] 7.7E-151 - T[137-487] 7.7E-151 |
| ProSiteProfiles |
CH-domain (IPR001715) - T[18-121] 13.442 |
| SUPERFAMILY |
CH_dom_sf (IPR036872) - T[18-121] 1.83E-22 |
| Pfam |
CH-domain (IPR001715) - T[19-121] 1.3E-14 |
| CDD |
CH-domain (IPR001715) - T[19-120] 9.06483E-12 |
| SMART |
CH-domain (IPR001715) - T[20-119] 4.5E-10 |
| ProSitePatterns |
Actinin_actin-bd_CS (IPR001589) - T[20-29] . |
| Gene3D |
DIX_dom_sf (IPR038207) - T[403-489] 1.5E-34 |
| SMART |
DIX (IPR001158) - T[407-489] 3.3E-19 |
| ProSiteProfiles |
DIX (IPR001158) - T[407-489] 24.977 |
| SUPERFAMILY |
Ubiquitin-like_domsf (IPR029071) - T[408-488] 1.65E-22 |
| Pfam |
DIX (IPR001158) - T[409-487] 1.4E-30 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DIXC1_HUMAN | 56.14 % | 134 | 1.04E-33 |