- Transcript 'Phmamm.CG.MTP2014.S4...' >
- Transcript 'KH2012:KH.L42.6.v1.A...' >
- Transcript 'Cisavi.CG.ENS81.R283...' >
- Transcript 'KH2012:KH.L37.5.v5.A...'
Transcript Model
Transcript Id
KH2012:KH.L37.5.v5.A.SL1-1
Possible name(s)
ACTN1; ACTN4; DIXDC1
Gene model
Location
KhL37 [27,084 / 31,942]
Amino acid sequence
Length: 486
>KH.L37.5.v5.A.SL1-1
WLAMSVKVKYITQEQVQAYTAWVNSQLKKRGKNIVNLGEDLKDGVALVAVVEIVSGHTLG
GIKPTCENEKRENVLKVLQFMRNAGIKLHHVSVDEITSGNVKTIMQLILALAAHFKPASI
GGRKVESPRQRNEVSLRIKQRWRDSRVKESIGKPGMESSMQADVEKELAAIRDITQCLQK
VLLEEIPGQPLEGHDADEQSVIIQARLDQAIVDKVNLEEENHIARQENRKLTSEKSALEQ
RFLQQEEELLSIRQQLLQSNLSRDKLQSEKAELIAELTETRRNQDELRTKCRDHERTLER
MENEAIQNKINHSREIRKLDKEIHLARQESYNGQINDSVFHDKPFIGSPNGKSPGSPFLN
RSKGSPLLGRSPTPNTPGSPILSRRSPLSRNHPSRRRKTMENHVTRVLYFTDRDMTPCMT
SISKRVGDITLGEFKTVIKKEGNYRFIFKALDPELGTVKEEVFHDDDVIPGWEGKIVAWV
EEVLRV
Nucleotide sequence
Length: 1,712
>KH2012:KH.L37.5.v5.A.SL1-1
TTTGTATAATAAAACCATTTGCTGTGTTGCATAGATTGTTGATTATAACTAATGGTTAGC
AATGAGTGTGAAAGTAAAATACATCACTCAGGAACAAGTACAAGCATACACAGCTTGGGT
TAACAGCCAGTTGAAGAAGAGAGGGAAAAATATTGTTAACCTTGGTGAAGATTTGAAAGA
TGGGGTGGCTTTGGTTGCGGTTGTGGAAATAGTTTCCGGCCATACATTGGGGGGGATTAA
ACCAACATGCGAGAACGAAAAGCGAGAAAATGTTTTAAAAGTTTTGCAGTTTATGAGAAA
TGCTGGGATTAAACTACATCATGTTTCAGTTGACGAGATAACGAGCGGTAATGTTAAAAC
CATCATGCAACTTATATTAGCGCTTGCTGCCCATTTTAAACCAGCCAGTATTGGTGGAAG
AAAAGTTGAATCGCCTCGCCAACGTAATGAAGTTTCATTGAGGATCAAACAAAGATGGAG
GGATAGCAGGGTGAAAGAATCTATCGGGAAACCTGGCATGGAATCGTCCATGCAAGCCGA
TGTAGAGAAAGAACTTGCCGCGATTCGTGATATAACTCAATGTCTACAGAAAGTGCTACT
CGAAGAAATACCTGGCCAACCACTTGAGGGACATGACGCAGATGAGCAAAGTGTGATCAT
TCAAGCGCGACTCGATCAAGCTATTGTGGATAAAGTAAACTTGGAGGAGGAAAACCACAT
CGCACGACAAGAAAATCGCAAACTAACATCGGAGAAGTCGGCGCTTGAACAAAGATTCCT
CCAACAAGAAGAAGAACTTTTATCGATCCGACAACAACTGTTGCAAAGCAATCTATCGAG
GGATAAACTACAATCCGAGAAGGCTGAATTAATAGCGGAACTCACGGAAACCCGACGTAA
CCAAGATGAACTTCGAACAAAATGTCGCGACCACGAGCGAACCTTGGAACGAATGGAGAA
CGAAGCGATTCAGAACAAAATAAACCACTCACGAGAAATACGAAAGTTGGACAAAGAAAT
TCACTTGGCACGTCAGGAATCATATAATGGTCAAATCAACGACAGTGTGTTCCATGACAA
ACCATTCATCGGTTCCCCAAATGGGAAATCCCCTGGTTCCCCCTTTCTCAATAGATCGAA
AGGGTCCCCATTATTAGGGAGATCCCCCACCCCCAATACTCCGGGTTCACCAATATTATC
ACGAAGGTCGCCTTTATCACGAAATCATCCATCACGCAGAAGGAAAACCATGGAGAACCA
CGTGACCCGCGTTCTTTACTTCACGGATAGAGACATGACGCCGTGTATGACGTCAATATC
GAAACGAGTCGGTGATATAACGCTGGGCGAATTCAAGACGGTGATAAAGAAGGAAGGAAA
TTATCGGTTTATTTTCAAAGCTCTTGATCCAGAACTTGGTACAGTGAAGGAAGAGGTGTT
TCACGATGATGACGTCATCCCGGGATGGGAGGGGAAGATTGTGGCATGGGTTGAGGAGGT
TTTGCGGGTGTGATGACGTAAAACATATGTCATAGTTTTTCTTCCAAGTCTTCCTGGGTG
CTAAATTGTTTCAGCCACGTCACCTCAACGGATTTTAACGAATTATGACGTCACCGTGAC
GTCATCACTGTGCGATCGGTGCAATTGTGTATAAAGTGCACTTATCGTTGTTGCCATAGT
TCTTCAATAAAAAAAACGTTTTAATCATAGAA
| Gene3D |
CH_dom_sf (IPR036872) - T[5-121] 2.1E-28 |
| PANTHER |
Dsh/Dvl-rel (IPR015506) - T[10-133] 1.5E-150 - T[132-482] 1.5E-150 |
| ProSiteProfiles |
CH-domain (IPR001715) - T[13-116] 13.442 |
| SUPERFAMILY |
CH_dom_sf (IPR036872) - T[13-116] 1.7E-22 |
| Pfam |
CH-domain (IPR001715) - T[14-116] 1.3E-14 |
| SMART |
CH-domain (IPR001715) - T[15-114] 4.5E-10 |
| ProSitePatterns |
Actinin_actin-bd_CS (IPR001589) - T[15-24] . |
| Gene3D |
DIX_dom_sf (IPR038207) - T[398-484] 1.5E-34 |
| ProSiteProfiles |
DIX (IPR001158) - T[402-484] 24.977 |
| SMART |
DIX (IPR001158) - T[402-484] 3.3E-19 |
| SUPERFAMILY |
Ubiquitin-like_domsf (IPR029071) - T[403-483] 1.65E-22 |
| Pfam |
DIX (IPR001158) - T[404-482] 1.3E-30 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DIXC1_HUMAN | 56.14 % | 135 | 6.83E-34 |