Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.L38.16.v1.A.nonSL11-1

Possible name(s)

VPS26A; VPS26B; VPS26C

Gene model

KH2012:KH.L38.16

Location

KhL38 [19,307 / 22,241]

Sequences

Amino acid sequence

Length: 312

>KH.L38.16.v1.A.nonSL11-1
FLIILKLVYDNLDKTNMATIEIKLNRPNKVYHEGETVTGAIIVESKTSLAYQSVSLIAEG
VAALTLSAKSVGRLESMYNSVKPISLFGHSIELARQGKIPAGTKSFPFEIPLKPHGSIKW
LLETYRGVYISVQYNIKCLLKRPLLNKDLTKETEIYIEYKSGDRANNKPIKFNINPNSIK
NANSQAEIPRFSVRGRLDSSVCCLTKPMTGELVVEASENPIRSIELQLMRVETVGSPDGF
AKEATEIQNIEIGCGDVCRGLSIPIFMIFPRMFACPTVDTPNFKIEFELNIVIVFEDDRM
ISENFPIKLTRF

Nucleotide sequence

Length: 1,426

>KH2012:KH.L38.16.v1.A.nonSL11-1
GTTTTTGATCATTTTAAAGTTAGTGTATGATAACTTGGATAAAACGAACATGGCAACTAT
AGAAATCAAGCTGAACAGACCAAACAAAGTTTATCACGAAGGGGAGACGGTTACTGGAGC
TATTATTGTTGAATCCAAGACCTCACTTGCTTACCAATCTGTGAGTCTTATTGCTGAGGG
TGTCGCAGCTTTAACGTTGAGCGCGAAAAGTGTTGGGAGGTTAGAGTCGATGTACAACAG
CGTGAAACCAATATCATTGTTTGGACATTCTATTGAACTTGCAAGACAGGGAAAAATACC
AGCGGGCACGAAAAGCTTTCCTTTTGAAATTCCATTAAAACCCCATGGAAGCATTAAATG
GTTGCTGGAAACTTATAGGGGAGTTTACATCTCTGTGCAGTACAACATCAAGTGCCTGTT
GAAACGACCATTGCTAAACAAGGATCTCACAAAAGAAACTGAGATTTATATTGAGTATAA
AAGTGGGGATAGAGCAAATAACAAACCTATAAAGTTTAACATTAATCCAAACTCTATAAA
GAATGCAAATTCACAAGCTGAGATCCCAAGATTCTCGGTCCGTGGTCGATTGGATTCTAG
TGTTTGTTGCCTCACCAAACCAATGACAGGGGAACTTGTCGTCGAAGCTTCGGAAAACCC
GATCCGTTCAATCGAGTTGCAACTAATGAGAGTGGAAACTGTGGGAAGTCCAGATGGTTT
TGCTAAAGAAGCCACTGAGATCCAGAACATAGAGATTGGTTGTGGTGATGTATGCAGAGG
ACTGAGCATCCCTATCTTCATGATCTTCCCCAGGATGTTTGCTTGCCCTACAGTTGACAC
ACCTAACTTTAAGATTGAGTTCGAACTTAACATTGTCATTGTGTTCGAAGACGACAGAAT
GATTAGCGAAAACTTCCCAATTAAACTCACCAGATTTTAATGCTTGTGTTGTAACTTGTG
ATTATAGGCATCAAACCTGGGGTGGCAGGGTGGACAGGCTAACCCTGGAATTTTCTGCAC
TGCATTAACCAGTAAACATTACAACCAATAAGTTAGATTTGTTTCACATGATTGTGTCTA
AGTATCCCTGCCTCCCCTGTGTTTATAAACTTTGGTGCCTGTGCTTGCAACTCCCTATTA
ATGTGCAATACACTTCTGCTGATTTACATTGATTTTTCAAACCTTATGGTGGCCAAGCAA
TGTCAGATTGGTCAATTTTGAGTGGCATACTGGTAAATAAATTTTTCAGCAATTGAAATT
AATTCAACCAAAAACACATCAATGCTGGACTTTAACTTGGTGTAATACAACATCCAGGTT
TTGCTAAAATACAAGAATTTCAATTTTTGGGTCATTTTTTATAATTATTTTCGCATGTAT
CTACATTAAATATAATTTGCAAATAAACTAAGAAAACACAAATTCA

InterProScan

Gene3D	Arrestin_C (IPR014752) - T[3-161] 5.0E-25 - T[191-312] 3.2E-12
Pfam	Vps26-related (IPR028934) - T[9-298] 1.1E-42
PANTHER	Vps26-related (IPR028934) - T[17-311] 6.3E-116
SUPERFAMILY	Ig_E-set (IPR014756) - T[20-157] 4.06E-9

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
DSCR3_HUMAN	51.536 %	327	1.63E-112