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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.S595.1.v2....' > 
  2. Transcript 'KH2012:KH.L38.16.v1....' > 
  3. Transcript 'KH2012:KH.L38.16.v1....' > 
  4. Transcript 'KH2012:KH.L38.16.v1....' > 
  5. Transcript 'KH2012:KH.L38.16.v1....'

Transcript Model

Transcript Id

KH2012:KH.L38.16.v1.A.nonSL14-1

Possible name(s)

VPS26A; VPS26B; VPS26C

Gene model

KH2012:KH.L38.16

Location

KhL38 [19,308 / 22,241]

Sequences

Amino acid sequence

Length: 312

>KH.L38.16.v1.A.nonSL14-1
FLIILKLVYDNLDKTNMATIEIKLNRPNKVYHEGETVTGAIIVESKTSLAYQSVSLIAEG
VAALTLSAKSVGRLESMYNSVKPISLFGHSIELARQGKIPAGTKSFPFEIPLKPHGSIKW
LLETYRGVYISVQYNIKCLLKRPLLNKDLTKETEIYIEYKSGDRANNKPIKFNINPNSIK
NANSQAEIPRFSVRGRLDSSVCCLTKPMTGELVVEASENPIRSIELQLMRVETVGSPDGF
AKEATEIQNIEIGCGDVCRGLSIPIFMIFPRMFACPTVDTPNFKIEFELNIVIVFEDDRM
ISENFPIKLTRF

Nucleotide sequence

Length: 1,425

>KH2012:KH.L38.16.v1.A.nonSL14-1
TTTTTGATCATTTTAAAGTTAGTGTATGATAACTTGGATAAAACGAACATGGCAACTATA
GAAATCAAGCTGAACAGACCAAACAAAGTTTATCACGAAGGGGAGACGGTTACTGGAGCT
ATTATTGTTGAATCCAAGACCTCACTTGCTTACCAATCTGTGAGTCTTATTGCTGAGGGT
GTCGCAGCTTTAACGTTGAGCGCGAAAAGTGTTGGGAGGTTAGAGTCGATGTACAACAGC
GTGAAACCAATATCATTGTTTGGACATTCTATTGAACTTGCAAGACAGGGAAAAATACCA
GCGGGCACGAAAAGCTTTCCTTTTGAAATTCCATTAAAACCCCATGGAAGCATTAAATGG
TTGCTGGAAACTTATAGGGGAGTTTACATCTCTGTGCAGTACAACATCAAGTGCCTGTTG
AAACGACCATTGCTAAACAAGGATCTCACAAAAGAAACTGAGATTTATATTGAGTATAAA
AGTGGGGATAGAGCAAATAACAAACCTATAAAGTTTAACATTAATCCAAACTCTATAAAG
AATGCAAATTCACAAGCTGAGATCCCAAGATTCTCGGTCCGTGGTCGATTGGATTCTAGT
GTTTGTTGCCTCACCAAACCAATGACAGGGGAACTTGTCGTCGAAGCTTCGGAAAACCCG
ATCCGTTCAATCGAGTTGCAACTAATGAGAGTGGAAACTGTGGGAAGTCCAGATGGTTTT
GCTAAAGAAGCCACTGAGATCCAGAACATAGAGATTGGTTGTGGTGATGTATGCAGAGGA
CTGAGCATCCCTATCTTCATGATCTTCCCCAGGATGTTTGCTTGCCCTACAGTTGACACA
CCTAACTTTAAGATTGAGTTCGAACTTAACATTGTCATTGTGTTCGAAGACGACAGAATG
ATTAGCGAAAACTTCCCAATTAAACTCACCAGATTTTAATGCTTGTGTTGTAACTTGTGA
TTATAGGCATCAAACCTGGGGTGGCAGGGTGGACAGGCTAACCCTGGAATTTTCTGCACT
GCATTAACCAGTAAACATTACAACCAATAAGTTAGATTTGTTTCACATGATTGTGTCTAA
GTATCCCTGCCTCCCCTGTGTTTATAAACTTTGGTGCCTGTGCTTGCAACTCCCTATTAA
TGTGCAATACACTTCTGCTGATTTACATTGATTTTTCAAACCTTATGGTGGCCAAGCAAT
GTCAGATTGGTCAATTTTGAGTGGCATACTGGTAAATAAATTTTTCAGCAATTGAAATTA
ATTCAACCAAAAACACATCAATGCTGGACTTTAACTTGGTGTAATACAACATCCAGGTTT
TGCTAAAATACAAGAATTTCAATTTTTGGGTCATTTTTTATAATTATTTTCGCATGTATC
TACATTAAATATAATTTGCAAATAAACTAAGAAAACACAAATTCA

InterProScan

Gene3D
Arrestin_C (IPR014752) - T[3-161] 5.0E-25 - T[191-312] 3.2E-12
Pfam
Vps26-related (IPR028934) - T[9-298] 1.1E-42
PANTHER
Vps26-related (IPR028934) - T[17-311] 6.3E-116
SUPERFAMILY
Ig_E-set (IPR014756) - T[20-157] 4.06E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DSCR3_HUMAN 51.536 % 327 1.63E-112