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  1. Transcript 'KH2012:KH.L38.16.v1....'

Transcript Model

Transcript Id

KH2012:KH.L38.16.v1.A.nonSL20-1

Possible name(s)

VPS26A; VPS26B; VPS26C

Gene model

KH2012:KH.L38.16

Location

KhL38 [19,278 / 22,241]

Sequences

Amino acid sequence

Length: 313

>KH.L38.16.v1.A.nonSL20-1
LFLIILKLVYDNLDKTNMATIEIKLNRPNKVYHEGETVTGAIIVESKTSLAYQSVSLIAE
GVAALTLSAKSVGRLESMYNSVKPISLFGHSIELARQGKIPAGTKSFPFEIPLKPHGSIK
WLLETYRGVYISVQYNIKCLLKRPLLNKDLTKETEIYIEYKSGDRANNKPIKFNINPNSI
KNANSQAEIPRFSVRGRLDSSVCCLTKPMTGELVVEASENPIRSIELQLMRVETVGSPDG
FAKEATEIQNIEIGCGDVCRGLSIPIFMIFPRMFACPTVDTPNFKIEFELNIVIVFEDDR
MISENFPIKLTRF

Nucleotide sequence

Length: 1,455

>KH2012:KH.L38.16.v1.A.nonSL20-1
GTATTACGAAGTGAACGATTCAGTTGATTGTTTTTGATCATTTTAAAGTTAGTGTATGAT
AACTTGGATAAAACGAACATGGCAACTATAGAAATCAAGCTGAACAGACCAAACAAAGTT
TATCACGAAGGGGAGACGGTTACTGGAGCTATTATTGTTGAATCCAAGACCTCACTTGCT
TACCAATCTGTGAGTCTTATTGCTGAGGGTGTCGCAGCTTTAACGTTGAGCGCGAAAAGT
GTTGGGAGGTTAGAGTCGATGTACAACAGCGTGAAACCAATATCATTGTTTGGACATTCT
ATTGAACTTGCAAGACAGGGAAAAATACCAGCGGGCACGAAAAGCTTTCCTTTTGAAATT
CCATTAAAACCCCATGGAAGCATTAAATGGTTGCTGGAAACTTATAGGGGAGTTTACATC
TCTGTGCAGTACAACATCAAGTGCCTGTTGAAACGACCATTGCTAAACAAGGATCTCACA
AAAGAAACTGAGATTTATATTGAGTATAAAAGTGGGGATAGAGCAAATAACAAACCTATA
AAGTTTAACATTAATCCAAACTCTATAAAGAATGCAAATTCACAAGCTGAGATCCCAAGA
TTCTCGGTCCGTGGTCGATTGGATTCTAGTGTTTGTTGCCTCACCAAACCAATGACAGGG
GAACTTGTCGTCGAAGCTTCGGAAAACCCGATCCGTTCAATCGAGTTGCAACTAATGAGA
GTGGAAACTGTGGGAAGTCCAGATGGTTTTGCTAAAGAAGCCACTGAGATCCAGAACATA
GAGATTGGTTGTGGTGATGTATGCAGAGGACTGAGCATCCCTATCTTCATGATCTTCCCC
AGGATGTTTGCTTGCCCTACAGTTGACACACCTAACTTTAAGATTGAGTTCGAACTTAAC
ATTGTCATTGTGTTCGAAGACGACAGAATGATTAGCGAAAACTTCCCAATTAAACTCACC
AGATTTTAATGCTTGTGTTGTAACTTGTGATTATAGGCATCAAACCTGGGGTGGCAGGGT
GGACAGGCTAACCCTGGAATTTTCTGCACTGCATTAACCAGTAAACATTACAACCAATAA
GTTAGATTTGTTTCACATGATTGTGTCTAAGTATCCCTGCCTCCCCTGTGTTTATAAACT
TTGGTGCCTGTGCTTGCAACTCCCTATTAATGTGCAATACACTTCTGCTGATTTACATTG
ATTTTTCAAACCTTATGGTGGCCAAGCAATGTCAGATTGGTCAATTTTGAGTGGCATACT
GGTAAATAAATTTTTCAGCAATTGAAATTAATTCAACCAAAAACACATCAATGCTGGACT
TTAACTTGGTGTAATACAACATCCAGGTTTTGCTAAAATACAAGAATTTCAATTTTTGGG
TCATTTTTTATAATTATTTTCGCATGTATCTACATTAAATATAATTTGCAAATAAACTAA
GAAAACACAAATTCA

InterProScan

Gene3D
Arrestin_C (IPR014752) - T[4-162] 5.1E-25 - T[192-313] 3.3E-12
Pfam
Vps26-related (IPR028934) - T[10-299] 1.1E-42
PANTHER
Vps26-related (IPR028934) - T[18-312] 6.4E-116
SUPERFAMILY
Ig_E-set (IPR014756) - T[21-158] 4.06E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DSCR3_HUMAN 51.536 % 328 1.12E-112