Aniseed - Transcript Card

Clone 'cibd064f21' >
Transcript 'KH2012:KH.L38.16.v1....'

Transcript Model

Transcript Id

KH2012:KH.L38.16.v1.A.nonSL22-1

Possible name(s)

VPS26A; VPS26B; VPS26C

Gene model

KH2012:KH.L38.16

Location

KhL38 [19,338 / 22,241]

Sequences

Amino acid sequence

Length: 302

>KH.L38.16.v1.A.nonSL22-1
NLDKTNMATIEIKLNRPNKVYHEGETVTGAIIVESKTSLAYQSVSLIAEGVAALTLSAKS
VGRLESMYNSVKPISLFGHSIELARQGKIPAGTKSFPFEIPLKPHGSIKWLLETYRGVYI
SVQYNIKCLLKRPLLNKDLTKETEIYIEYKSGDRANNKPIKFNINPNSIKNANSQAEIPR
FSVRGRLDSSVCCLTKPMTGELVVEASENPIRSIELQLMRVETVGSPDGFAKEATEIQNI
EIGCGDVCRGLSIPIFMIFPRMFACPTVDTPNFKIEFELNIVIVFEDDRMISENFPIKLT
RF

Nucleotide sequence

Length: 1,395

>KH2012:KH.L38.16.v1.A.nonSL22-1
AACTTGGATAAAACGAACATGGCAACTATAGAAATCAAGCTGAACAGACCAAACAAAGTT
TATCACGAAGGGGAGACGGTTACTGGAGCTATTATTGTTGAATCCAAGACCTCACTTGCT
TACCAATCTGTGAGTCTTATTGCTGAGGGTGTCGCAGCTTTAACGTTGAGCGCGAAAAGT
GTTGGGAGGTTAGAGTCGATGTACAACAGCGTGAAACCAATATCATTGTTTGGACATTCT
ATTGAACTTGCAAGACAGGGAAAAATACCAGCGGGCACGAAAAGCTTTCCTTTTGAAATT
CCATTAAAACCCCATGGAAGCATTAAATGGTTGCTGGAAACTTATAGGGGAGTTTACATC
TCTGTGCAGTACAACATCAAGTGCCTGTTGAAACGACCATTGCTAAACAAGGATCTCACA
AAAGAAACTGAGATTTATATTGAGTATAAAAGTGGGGATAGAGCAAATAACAAACCTATA
AAGTTTAACATTAATCCAAACTCTATAAAGAATGCAAATTCACAAGCTGAGATCCCAAGA
TTCTCGGTCCGTGGTCGATTGGATTCTAGTGTTTGTTGCCTCACCAAACCAATGACAGGG
GAACTTGTCGTCGAAGCTTCGGAAAACCCGATCCGTTCAATCGAGTTGCAACTAATGAGA
GTGGAAACTGTGGGAAGTCCAGATGGTTTTGCTAAAGAAGCCACTGAGATCCAGAACATA
GAGATTGGTTGTGGTGATGTATGCAGAGGACTGAGCATCCCTATCTTCATGATCTTCCCC
AGGATGTTTGCTTGCCCTACAGTTGACACACCTAACTTTAAGATTGAGTTCGAACTTAAC
ATTGTCATTGTGTTCGAAGACGACAGAATGATTAGCGAAAACTTCCCAATTAAACTCACC
AGATTTTAATGCTTGTGTTGTAACTTGTGATTATAGGCATCAAACCTGGGGTGGCAGGGT
GGACAGGCTAACCCTGGAATTTTCTGCACTGCATTAACCAGTAAACATTACAACCAATAA
GTTAGATTTGTTTCACATGATTGTGTCTAAGTATCCCTGCCTCCCCTGTGTTTATAAACT
TTGGTGCCTGTGCTTGCAACTCCCTATTAATGTGCAATACACTTCTGCTGATTTACATTG
ATTTTTCAAACCTTATGGTGGCCAAGCAATGTCAGATTGGTCAATTTTGAGTGGCATACT
GGTAAATAAATTTTTCAGCAATTGAAATTAATTCAACCAAAAACACATCAATGCTGGACT
TTAACTTGGTGTAATACAACATCCAGGTTTTGCTAAAATACAAGAATTTCAATTTTTGGG
TCATTTTTTATAATTATTTTCGCATGTATCTACATTAAATATAATTTGCAAATAAACTAA
GAAAACACAAATTCA

InterProScan

Gene3D	Arrestin_C (IPR014752) - T[2-151] 1.0E-24 - T[181-302] 3.0E-12
PANTHER	Vps26-related (IPR028934) - T[7-301] 5.6E-116
SUPERFAMILY	Ig_E-set (IPR014756) - T[10-147] 3.85E-9
Pfam	Vps26-related (IPR028934) - T[16-288] 2.7E-42

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
DSCR3_HUMAN	51.536 %	327	9.24E-113