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  1. Transcript 'KH2012:KH.L38.16.v1....'

Transcript Model

Transcript Id

KH2012:KH.L38.16.v1.A.nonSL23-1

Possible name(s)

VPS26A; VPS26B; VPS26C

Location

KhL38 [19,322 / 22,241]

Sequences

Amino acid sequence

Length: 307

>KH.L38.16.v1.A.nonSL23-1
KLVYDNLDKTNMATIEIKLNRPNKVYHEGETVTGAIIVESKTSLAYQSVSLIAEGVAALT
LSAKSVGRLESMYNSVKPISLFGHSIELARQGKIPAGTKSFPFEIPLKPHGSIKWLLETY
RGVYISVQYNIKCLLKRPLLNKDLTKETEIYIEYKSGDRANNKPIKFNINPNSIKNANSQ
AEIPRFSVRGRLDSSVCCLTKPMTGELVVEASENPIRSIELQLMRVETVGSPDGFAKEAT
EIQNIEIGCGDVCRGLSIPIFMIFPRMFACPTVDTPNFKIEFELNIVIVFEDDRMISENF
PIKLTRF

Nucleotide sequence

Length: 1,411

>KH2012:KH.L38.16.v1.A.nonSL23-1
AAAGTTAGTGTATGATAACTTGGATAAAACGAACATGGCAACTATAGAAATCAAGCTGAA
CAGACCAAACAAAGTTTATCACGAAGGGGAGACGGTTACTGGAGCTATTATTGTTGAATC
CAAGACCTCACTTGCTTACCAATCTGTGAGTCTTATTGCTGAGGGTGTCGCAGCTTTAAC
GTTGAGCGCGAAAAGTGTTGGGAGGTTAGAGTCGATGTACAACAGCGTGAAACCAATATC
ATTGTTTGGACATTCTATTGAACTTGCAAGACAGGGAAAAATACCAGCGGGCACGAAAAG
CTTTCCTTTTGAAATTCCATTAAAACCCCATGGAAGCATTAAATGGTTGCTGGAAACTTA
TAGGGGAGTTTACATCTCTGTGCAGTACAACATCAAGTGCCTGTTGAAACGACCATTGCT
AAACAAGGATCTCACAAAAGAAACTGAGATTTATATTGAGTATAAAAGTGGGGATAGAGC
AAATAACAAACCTATAAAGTTTAACATTAATCCAAACTCTATAAAGAATGCAAATTCACA
AGCTGAGATCCCAAGATTCTCGGTCCGTGGTCGATTGGATTCTAGTGTTTGTTGCCTCAC
CAAACCAATGACAGGGGAACTTGTCGTCGAAGCTTCGGAAAACCCGATCCGTTCAATCGA
GTTGCAACTAATGAGAGTGGAAACTGTGGGAAGTCCAGATGGTTTTGCTAAAGAAGCCAC
TGAGATCCAGAACATAGAGATTGGTTGTGGTGATGTATGCAGAGGACTGAGCATCCCTAT
CTTCATGATCTTCCCCAGGATGTTTGCTTGCCCTACAGTTGACACACCTAACTTTAAGAT
TGAGTTCGAACTTAACATTGTCATTGTGTTCGAAGACGACAGAATGATTAGCGAAAACTT
CCCAATTAAACTCACCAGATTTTAATGCTTGTGTTGTAACTTGTGATTATAGGCATCAAA
CCTGGGGTGGCAGGGTGGACAGGCTAACCCTGGAATTTTCTGCACTGCATTAACCAGTAA
ACATTACAACCAATAAGTTAGATTTGTTTCACATGATTGTGTCTAAGTATCCCTGCCTCC
CCTGTGTTTATAAACTTTGGTGCCTGTGCTTGCAACTCCCTATTAATGTGCAATACACTT
CTGCTGATTTACATTGATTTTTCAAACCTTATGGTGGCCAAGCAATGTCAGATTGGTCAA
TTTTGAGTGGCATACTGGTAAATAAATTTTTCAGCAATTGAAATTAATTCAACCAAAAAC
ACATCAATGCTGGACTTTAACTTGGTGTAATACAACATCCAGGTTTTGCTAAAATACAAG
AATTTCAATTTTTGGGTCATTTTTTATAATTATTTTCGCATGTATCTACATTAAATATAA
TTTGCAAATAAACTAAGAAAACACAAATTCA

InterProScan

Gene3D
Arrestin_C (IPR014752) - T[2-156] 6.9E-25 - T[186-307] 3.1E-12
PANTHER
Vps26-related (IPR028934) - T[12-306] 5.9E-116
SUPERFAMILY
Ig_E-set (IPR014756) - T[15-152] 3.85E-9
Pfam
Vps26-related (IPR028934) - T[20-293] 1.5E-42

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DSCR3_HUMAN 51.536 % 327 1.12E-112