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TRANSCRIPT CARD

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  1. Transcript 'Boleac.CG.SB_v3.S8.g...' > 
  2. Transcript 'KH2012:KH.L38.16.v1....'

Transcript Model

Transcript Id

KH2012:KH.L38.16.v1.A.nonSL27-1

Possible name(s)

VPS26A; VPS26B; VPS26C

Gene model

KH2012:KH.L38.16

Location

KhL38 [19,327 / 22,241]

Sequences

Amino acid sequence

Length: 305

>KH.L38.16.v1.A.nonSL27-1
VYDNLDKTNMATIEIKLNRPNKVYHEGETVTGAIIVESKTSLAYQSVSLIAEGVAALTLS
AKSVGRLESMYNSVKPISLFGHSIELARQGKIPAGTKSFPFEIPLKPHGSIKWLLETYRG
VYISVQYNIKCLLKRPLLNKDLTKETEIYIEYKSGDRANNKPIKFNINPNSIKNANSQAE
IPRFSVRGRLDSSVCCLTKPMTGELVVEASENPIRSIELQLMRVETVGSPDGFAKEATEI
QNIEIGCGDVCRGLSIPIFMIFPRMFACPTVDTPNFKIEFELNIVIVFEDDRMISENFPI
KLTRF

Nucleotide sequence

Length: 1,406

>KH2012:KH.L38.16.v1.A.nonSL27-1
TAGTGTATGATAACTTGGATAAAACGAACATGGCAACTATAGAAATCAAGCTGAACAGAC
CAAACAAAGTTTATCACGAAGGGGAGACGGTTACTGGAGCTATTATTGTTGAATCCAAGA
CCTCACTTGCTTACCAATCTGTGAGTCTTATTGCTGAGGGTGTCGCAGCTTTAACGTTGA
GCGCGAAAAGTGTTGGGAGGTTAGAGTCGATGTACAACAGCGTGAAACCAATATCATTGT
TTGGACATTCTATTGAACTTGCAAGACAGGGAAAAATACCAGCGGGCACGAAAAGCTTTC
CTTTTGAAATTCCATTAAAACCCCATGGAAGCATTAAATGGTTGCTGGAAACTTATAGGG
GAGTTTACATCTCTGTGCAGTACAACATCAAGTGCCTGTTGAAACGACCATTGCTAAACA
AGGATCTCACAAAAGAAACTGAGATTTATATTGAGTATAAAAGTGGGGATAGAGCAAATA
ACAAACCTATAAAGTTTAACATTAATCCAAACTCTATAAAGAATGCAAATTCACAAGCTG
AGATCCCAAGATTCTCGGTCCGTGGTCGATTGGATTCTAGTGTTTGTTGCCTCACCAAAC
CAATGACAGGGGAACTTGTCGTCGAAGCTTCGGAAAACCCGATCCGTTCAATCGAGTTGC
AACTAATGAGAGTGGAAACTGTGGGAAGTCCAGATGGTTTTGCTAAAGAAGCCACTGAGA
TCCAGAACATAGAGATTGGTTGTGGTGATGTATGCAGAGGACTGAGCATCCCTATCTTCA
TGATCTTCCCCAGGATGTTTGCTTGCCCTACAGTTGACACACCTAACTTTAAGATTGAGT
TCGAACTTAACATTGTCATTGTGTTCGAAGACGACAGAATGATTAGCGAAAACTTCCCAA
TTAAACTCACCAGATTTTAATGCTTGTGTTGTAACTTGTGATTATAGGCATCAAACCTGG
GGTGGCAGGGTGGACAGGCTAACCCTGGAATTTTCTGCACTGCATTAACCAGTAAACATT
ACAACCAATAAGTTAGATTTGTTTCACATGATTGTGTCTAAGTATCCCTGCCTCCCCTGT
GTTTATAAACTTTGGTGCCTGTGCTTGCAACTCCCTATTAATGTGCAATACACTTCTGCT
GATTTACATTGATTTTTCAAACCTTATGGTGGCCAAGCAATGTCAGATTGGTCAATTTTG
AGTGGCATACTGGTAAATAAATTTTTCAGCAATTGAAATTAATTCAACCAAAAACACATC
AATGCTGGACTTTAACTTGGTGTAATACAACATCCAGGTTTTGCTAAAATACAAGAATTT
CAATTTTTGGGTCATTTTTTATAATTATTTTCGCATGTATCTACATTAAATATAATTTGC
AAATAAACTAAGAAAACACAAATTCA

InterProScan

Gene3D
Arrestin_C (IPR014752) - T[2-154] 7.8E-25 - T[184-305] 3.1E-12
PANTHER
Vps26-related (IPR028934) - T[10-304] 5.8E-116
SUPERFAMILY
Ig_E-set (IPR014756) - T[13-150] 3.85E-9
Pfam
Vps26-related (IPR028934) - T[19-291] 2.1E-42

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DSCR3_HUMAN 51.536 % 327 1.0E-112