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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C14.52.v1....' > 
  2. Transcript 'Mooccu.CG.ELv1_2.S26...' > 
  3. Transcript 'KH2012:KH.C8.163.v4....' > 
  4. Transcript 'KH2012:KH.S595.1.v1....' > 
  5. Transcript 'KH2012:KH.L38.16.v1....'

Transcript Model

Transcript Id

KH2012:KH.L38.16.v1.A.nonSL28-1

Possible name(s)

VPS26A; VPS26B; VPS26C

Gene model

KH2012:KH.L38.16

Location

KhL38 [19,319 / 22,241]

Sequences

Amino acid sequence

Length: 308

>KH.L38.16.v1.A.nonSL28-1
LKLVYDNLDKTNMATIEIKLNRPNKVYHEGETVTGAIIVESKTSLAYQSVSLIAEGVAAL
TLSAKSVGRLESMYNSVKPISLFGHSIELARQGKIPAGTKSFPFEIPLKPHGSIKWLLET
YRGVYISVQYNIKCLLKRPLLNKDLTKETEIYIEYKSGDRANNKPIKFNINPNSIKNANS
QAEIPRFSVRGRLDSSVCCLTKPMTGELVVEASENPIRSIELQLMRVETVGSPDGFAKEA
TEIQNIEIGCGDVCRGLSIPIFMIFPRMFACPTVDTPNFKIEFELNIVIVFEDDRMISEN
FPIKLTRF

Nucleotide sequence

Length: 1,414

>KH2012:KH.L38.16.v1.A.nonSL28-1
TTTAAAGTTAGTGTATGATAACTTGGATAAAACGAACATGGCAACTATAGAAATCAAGCT
GAACAGACCAAACAAAGTTTATCACGAAGGGGAGACGGTTACTGGAGCTATTATTGTTGA
ATCCAAGACCTCACTTGCTTACCAATCTGTGAGTCTTATTGCTGAGGGTGTCGCAGCTTT
AACGTTGAGCGCGAAAAGTGTTGGGAGGTTAGAGTCGATGTACAACAGCGTGAAACCAAT
ATCATTGTTTGGACATTCTATTGAACTTGCAAGACAGGGAAAAATACCAGCGGGCACGAA
AAGCTTTCCTTTTGAAATTCCATTAAAACCCCATGGAAGCATTAAATGGTTGCTGGAAAC
TTATAGGGGAGTTTACATCTCTGTGCAGTACAACATCAAGTGCCTGTTGAAACGACCATT
GCTAAACAAGGATCTCACAAAAGAAACTGAGATTTATATTGAGTATAAAAGTGGGGATAG
AGCAAATAACAAACCTATAAAGTTTAACATTAATCCAAACTCTATAAAGAATGCAAATTC
ACAAGCTGAGATCCCAAGATTCTCGGTCCGTGGTCGATTGGATTCTAGTGTTTGTTGCCT
CACCAAACCAATGACAGGGGAACTTGTCGTCGAAGCTTCGGAAAACCCGATCCGTTCAAT
CGAGTTGCAACTAATGAGAGTGGAAACTGTGGGAAGTCCAGATGGTTTTGCTAAAGAAGC
CACTGAGATCCAGAACATAGAGATTGGTTGTGGTGATGTATGCAGAGGACTGAGCATCCC
TATCTTCATGATCTTCCCCAGGATGTTTGCTTGCCCTACAGTTGACACACCTAACTTTAA
GATTGAGTTCGAACTTAACATTGTCATTGTGTTCGAAGACGACAGAATGATTAGCGAAAA
CTTCCCAATTAAACTCACCAGATTTTAATGCTTGTGTTGTAACTTGTGATTATAGGCATC
AAACCTGGGGTGGCAGGGTGGACAGGCTAACCCTGGAATTTTCTGCACTGCATTAACCAG
TAAACATTACAACCAATAAGTTAGATTTGTTTCACATGATTGTGTCTAAGTATCCCTGCC
TCCCCTGTGTTTATAAACTTTGGTGCCTGTGCTTGCAACTCCCTATTAATGTGCAATACA
CTTCTGCTGATTTACATTGATTTTTCAAACCTTATGGTGGCCAAGCAATGTCAGATTGGT
CAATTTTGAGTGGCATACTGGTAAATAAATTTTTCAGCAATTGAAATTAATTCAACCAAA
AACACATCAATGCTGGACTTTAACTTGGTGTAATACAACATCCAGGTTTTGCTAAAATAC
AAGAATTTCAATTTTTGGGTCATTTTTTATAATTATTTTCGCATGTATCTACATTAAATA
TAATTTGCAAATAAACTAAGAAAACACAAATTCA

InterProScan

Gene3D
Arrestin_C (IPR014752) - T[1-157] 5.5E-25 - T[187-308] 3.2E-12
Pfam
Vps26-related (IPR028934) - T[9-294] 1.3E-42
PANTHER
Vps26-related (IPR028934) - T[13-307] 6.0E-116
SUPERFAMILY
Ig_E-set (IPR014756) - T[16-153] 3.92E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DSCR3_HUMAN 51.536 % 327 1.09E-112