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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.S1479.1.v1...' > 
  2. Transcript 'KH2012:KH.S595.1.v2....' > 
  3. Transcript 'KH2012:KH.S595.1.v1....' > 
  4. Transcript 'KH2012:KH.L38.16.v1....'

Transcript Model

Transcript Id

KH2012:KH.L38.16.v1.A.nonSL31-1

Possible name(s)

VPS26A; VPS26B; VPS26C

Gene model

KH2012:KH.L38.16

Location

KhL38 [19,315 / 22,241]

Sequences

Amino acid sequence

Length: 309

>KH.L38.16.v1.A.nonSL31-1
ILKLVYDNLDKTNMATIEIKLNRPNKVYHEGETVTGAIIVESKTSLAYQSVSLIAEGVAA
LTLSAKSVGRLESMYNSVKPISLFGHSIELARQGKIPAGTKSFPFEIPLKPHGSIKWLLE
TYRGVYISVQYNIKCLLKRPLLNKDLTKETEIYIEYKSGDRANNKPIKFNINPNSIKNAN
SQAEIPRFSVRGRLDSSVCCLTKPMTGELVVEASENPIRSIELQLMRVETVGSPDGFAKE
ATEIQNIEIGCGDVCRGLSIPIFMIFPRMFACPTVDTPNFKIEFELNIVIVFEDDRMISE
NFPIKLTRF

Nucleotide sequence

Length: 1,418

>KH2012:KH.L38.16.v1.A.nonSL31-1
TCATTTTAAAGTTAGTGTATGATAACTTGGATAAAACGAACATGGCAACTATAGAAATCA
AGCTGAACAGACCAAACAAAGTTTATCACGAAGGGGAGACGGTTACTGGAGCTATTATTG
TTGAATCCAAGACCTCACTTGCTTACCAATCTGTGAGTCTTATTGCTGAGGGTGTCGCAG
CTTTAACGTTGAGCGCGAAAAGTGTTGGGAGGTTAGAGTCGATGTACAACAGCGTGAAAC
CAATATCATTGTTTGGACATTCTATTGAACTTGCAAGACAGGGAAAAATACCAGCGGGCA
CGAAAAGCTTTCCTTTTGAAATTCCATTAAAACCCCATGGAAGCATTAAATGGTTGCTGG
AAACTTATAGGGGAGTTTACATCTCTGTGCAGTACAACATCAAGTGCCTGTTGAAACGAC
CATTGCTAAACAAGGATCTCACAAAAGAAACTGAGATTTATATTGAGTATAAAAGTGGGG
ATAGAGCAAATAACAAACCTATAAAGTTTAACATTAATCCAAACTCTATAAAGAATGCAA
ATTCACAAGCTGAGATCCCAAGATTCTCGGTCCGTGGTCGATTGGATTCTAGTGTTTGTT
GCCTCACCAAACCAATGACAGGGGAACTTGTCGTCGAAGCTTCGGAAAACCCGATCCGTT
CAATCGAGTTGCAACTAATGAGAGTGGAAACTGTGGGAAGTCCAGATGGTTTTGCTAAAG
AAGCCACTGAGATCCAGAACATAGAGATTGGTTGTGGTGATGTATGCAGAGGACTGAGCA
TCCCTATCTTCATGATCTTCCCCAGGATGTTTGCTTGCCCTACAGTTGACACACCTAACT
TTAAGATTGAGTTCGAACTTAACATTGTCATTGTGTTCGAAGACGACAGAATGATTAGCG
AAAACTTCCCAATTAAACTCACCAGATTTTAATGCTTGTGTTGTAACTTGTGATTATAGG
CATCAAACCTGGGGTGGCAGGGTGGACAGGCTAACCCTGGAATTTTCTGCACTGCATTAA
CCAGTAAACATTACAACCAATAAGTTAGATTTGTTTCACATGATTGTGTCTAAGTATCCC
TGCCTCCCCTGTGTTTATAAACTTTGGTGCCTGTGCTTGCAACTCCCTATTAATGTGCAA
TACACTTCTGCTGATTTACATTGATTTTTCAAACCTTATGGTGGCCAAGCAATGTCAGAT
TGGTCAATTTTGAGTGGCATACTGGTAAATAAATTTTTCAGCAATTGAAATTAATTCAAC
CAAAAACACATCAATGCTGGACTTTAACTTGGTGTAATACAACATCCAGGTTTTGCTAAA
ATACAAGAATTTCAATTTTTGGGTCATTTTTTATAATTATTTTCGCATGTATCTACATTA
AATATAATTTGCAAATAAACTAAGAAAACACAAATTCA

InterProScan

Gene3D
Arrestin_C (IPR014752) - T[2-158] 5.6E-25 - T[188-309] 3.2E-12
Pfam
Vps26-related (IPR028934) - T[10-295] 1.3E-42
PANTHER
Vps26-related (IPR028934) - T[14-308] 6.1E-116
SUPERFAMILY
Ig_E-set (IPR014756) - T[17-154] 3.92E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DSCR3_HUMAN 51.536 % 327 1.09E-112