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  1. Transcript 'KH2012:KH.L38.16.v1....'

Transcript Model

Transcript Id

KH2012:KH.L38.16.v1.A.nonSL4-1

Possible name(s)

VPS26A; VPS26B; VPS26C

Gene model

KH2012:KH.L38.16

Location

KhL38 [19,333 / 22,241]

Sequences

Amino acid sequence

Length: 303

>KH.L38.16.v1.A.nonSL4-1
DNLDKTNMATIEIKLNRPNKVYHEGETVTGAIIVESKTSLAYQSVSLIAEGVAALTLSAK
SVGRLESMYNSVKPISLFGHSIELARQGKIPAGTKSFPFEIPLKPHGSIKWLLETYRGVY
ISVQYNIKCLLKRPLLNKDLTKETEIYIEYKSGDRANNKPIKFNINPNSIKNANSQAEIP
RFSVRGRLDSSVCCLTKPMTGELVVEASENPIRSIELQLMRVETVGSPDGFAKEATEIQN
IEIGCGDVCRGLSIPIFMIFPRMFACPTVDTPNFKIEFELNIVIVFEDDRMISENFPIKL
TRF

Nucleotide sequence

Length: 1,400

>KH2012:KH.L38.16.v1.A.nonSL4-1
ATGATAACTTGGATAAAACGAACATGGCAACTATAGAAATCAAGCTGAACAGACCAAACA
AAGTTTATCACGAAGGGGAGACGGTTACTGGAGCTATTATTGTTGAATCCAAGACCTCAC
TTGCTTACCAATCTGTGAGTCTTATTGCTGAGGGTGTCGCAGCTTTAACGTTGAGCGCGA
AAAGTGTTGGGAGGTTAGAGTCGATGTACAACAGCGTGAAACCAATATCATTGTTTGGAC
ATTCTATTGAACTTGCAAGACAGGGAAAAATACCAGCGGGCACGAAAAGCTTTCCTTTTG
AAATTCCATTAAAACCCCATGGAAGCATTAAATGGTTGCTGGAAACTTATAGGGGAGTTT
ACATCTCTGTGCAGTACAACATCAAGTGCCTGTTGAAACGACCATTGCTAAACAAGGATC
TCACAAAAGAAACTGAGATTTATATTGAGTATAAAAGTGGGGATAGAGCAAATAACAAAC
CTATAAAGTTTAACATTAATCCAAACTCTATAAAGAATGCAAATTCACAAGCTGAGATCC
CAAGATTCTCGGTCCGTGGTCGATTGGATTCTAGTGTTTGTTGCCTCACCAAACCAATGA
CAGGGGAACTTGTCGTCGAAGCTTCGGAAAACCCGATCCGTTCAATCGAGTTGCAACTAA
TGAGAGTGGAAACTGTGGGAAGTCCAGATGGTTTTGCTAAAGAAGCCACTGAGATCCAGA
ACATAGAGATTGGTTGTGGTGATGTATGCAGAGGACTGAGCATCCCTATCTTCATGATCT
TCCCCAGGATGTTTGCTTGCCCTACAGTTGACACACCTAACTTTAAGATTGAGTTCGAAC
TTAACATTGTCATTGTGTTCGAAGACGACAGAATGATTAGCGAAAACTTCCCAATTAAAC
TCACCAGATTTTAATGCTTGTGTTGTAACTTGTGATTATAGGCATCAAACCTGGGGTGGC
AGGGTGGACAGGCTAACCCTGGAATTTTCTGCACTGCATTAACCAGTAAACATTACAACC
AATAAGTTAGATTTGTTTCACATGATTGTGTCTAAGTATCCCTGCCTCCCCTGTGTTTAT
AAACTTTGGTGCCTGTGCTTGCAACTCCCTATTAATGTGCAATACACTTCTGCTGATTTA
CATTGATTTTTCAAACCTTATGGTGGCCAAGCAATGTCAGATTGGTCAATTTTGAGTGGC
ATACTGGTAAATAAATTTTTCAGCAATTGAAATTAATTCAACCAAAAACACATCAATGCT
GGACTTTAACTTGGTGTAATACAACATCCAGGTTTTGCTAAAATACAAGAATTTCAATTT
TTGGGTCATTTTTTATAATTATTTTCGCATGTATCTACATTAAATATAATTTGCAAATAA
ACTAAGAAAACACAAATTCA

InterProScan

Gene3D
Arrestin_C (IPR014752) - T[1-152] 8.2E-25 - T[182-303] 3.0E-12
PANTHER
Vps26-related (IPR028934) - T[8-302] 5.6E-116
SUPERFAMILY
Ig_E-set (IPR014756) - T[11-148] 3.78E-9
Pfam
Vps26-related (IPR028934) - T[17-289] 2.5E-42

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DSCR3_HUMAN 51.536 % 327 1.29E-112