Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.L38.16.v1.A.nonSL6-1

Possible name(s)

VPS26A; VPS26B; VPS26C

Gene model

KH2012:KH.L38.16

Location

KhL38 [19,318 / 22,241]

Sequences

Amino acid sequence

Length: 308

>KH.L38.16.v1.A.nonSL6-1
LKLVYDNLDKTNMATIEIKLNRPNKVYHEGETVTGAIIVESKTSLAYQSVSLIAEGVAAL
TLSAKSVGRLESMYNSVKPISLFGHSIELARQGKIPAGTKSFPFEIPLKPHGSIKWLLET
YRGVYISVQYNIKCLLKRPLLNKDLTKETEIYIEYKSGDRANNKPIKFNINPNSIKNANS
QAEIPRFSVRGRLDSSVCCLTKPMTGELVVEASENPIRSIELQLMRVETVGSPDGFAKEA
TEIQNIEIGCGDVCRGLSIPIFMIFPRMFACPTVDTPNFKIEFELNIVIVFEDDRMISEN
FPIKLTRF

Nucleotide sequence

Length: 1,415

>KH2012:KH.L38.16.v1.A.nonSL6-1
TTTTAAAGTTAGTGTATGATAACTTGGATAAAACGAACATGGCAACTATAGAAATCAAGC
TGAACAGACCAAACAAAGTTTATCACGAAGGGGAGACGGTTACTGGAGCTATTATTGTTG
AATCCAAGACCTCACTTGCTTACCAATCTGTGAGTCTTATTGCTGAGGGTGTCGCAGCTT
TAACGTTGAGCGCGAAAAGTGTTGGGAGGTTAGAGTCGATGTACAACAGCGTGAAACCAA
TATCATTGTTTGGACATTCTATTGAACTTGCAAGACAGGGAAAAATACCAGCGGGCACGA
AAAGCTTTCCTTTTGAAATTCCATTAAAACCCCATGGAAGCATTAAATGGTTGCTGGAAA
CTTATAGGGGAGTTTACATCTCTGTGCAGTACAACATCAAGTGCCTGTTGAAACGACCAT
TGCTAAACAAGGATCTCACAAAAGAAACTGAGATTTATATTGAGTATAAAAGTGGGGATA
GAGCAAATAACAAACCTATAAAGTTTAACATTAATCCAAACTCTATAAAGAATGCAAATT
CACAAGCTGAGATCCCAAGATTCTCGGTCCGTGGTCGATTGGATTCTAGTGTTTGTTGCC
TCACCAAACCAATGACAGGGGAACTTGTCGTCGAAGCTTCGGAAAACCCGATCCGTTCAA
TCGAGTTGCAACTAATGAGAGTGGAAACTGTGGGAAGTCCAGATGGTTTTGCTAAAGAAG
CCACTGAGATCCAGAACATAGAGATTGGTTGTGGTGATGTATGCAGAGGACTGAGCATCC
CTATCTTCATGATCTTCCCCAGGATGTTTGCTTGCCCTACAGTTGACACACCTAACTTTA
AGATTGAGTTCGAACTTAACATTGTCATTGTGTTCGAAGACGACAGAATGATTAGCGAAA
ACTTCCCAATTAAACTCACCAGATTTTAATGCTTGTGTTGTAACTTGTGATTATAGGCAT
CAAACCTGGGGTGGCAGGGTGGACAGGCTAACCCTGGAATTTTCTGCACTGCATTAACCA
GTAAACATTACAACCAATAAGTTAGATTTGTTTCACATGATTGTGTCTAAGTATCCCTGC
CTCCCCTGTGTTTATAAACTTTGGTGCCTGTGCTTGCAACTCCCTATTAATGTGCAATAC
ACTTCTGCTGATTTACATTGATTTTTCAAACCTTATGGTGGCCAAGCAATGTCAGATTGG
TCAATTTTGAGTGGCATACTGGTAAATAAATTTTTCAGCAATTGAAATTAATTCAACCAA
AAACACATCAATGCTGGACTTTAACTTGGTGTAATACAACATCCAGGTTTTGCTAAAATA
CAAGAATTTCAATTTTTGGGTCATTTTTTATAATTATTTTCGCATGTATCTACATTAAAT
ATAATTTGCAAATAAACTAAGAAAACACAAATTCA

InterProScan

Gene3D	Arrestin_C (IPR014752) - T[1-157] 5.5E-25 - T[187-308] 3.2E-12
Pfam	Vps26-related (IPR028934) - T[9-294] 1.3E-42
PANTHER	Vps26-related (IPR028934) - T[13-307] 6.0E-116
SUPERFAMILY	Ig_E-set (IPR014756) - T[16-153] 3.92E-9

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
DSCR3_HUMAN	51.536 %	327	1.09E-112