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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.L38.16.v1....' > 
  2. Transcript 'KH2012:KH.L38.16.v1....'

Transcript Model

Transcript Id

KH2012:KH.L38.16.v1.A.nonSL8-1

Possible name(s)

VPS26A; VPS26B; VPS26C

Gene model

KH2012:KH.L38.16

Location

KhL38 [19,356 / 22,241]

Sequences

Amino acid sequence

Length: 296

>KH.L38.16.v1.A.nonSL8-1
MATIEIKLNRPNKVYHEGETVTGAIIVESKTSLAYQSVSLIAEGVAALTLSAKSVGRLES
MYNSVKPISLFGHSIELARQGKIPAGTKSFPFEIPLKPHGSIKWLLETYRGVYISVQYNI
KCLLKRPLLNKDLTKETEIYIEYKSGDRANNKPIKFNINPNSIKNANSQAEIPRFSVRGR
LDSSVCCLTKPMTGELVVEASENPIRSIELQLMRVETVGSPDGFAKEATEIQNIEIGCGD
VCRGLSIPIFMIFPRMFACPTVDTPNFKIEFELNIVIVFEDDRMISENFPIKLTRF

Nucleotide sequence

Length: 1,377

>KH2012:KH.L38.16.v1.A.nonSL8-1
ATGGCAACTATAGAAATCAAGCTGAACAGACCAAACAAAGTTTATCACGAAGGGGAGACG
GTTACTGGAGCTATTATTGTTGAATCCAAGACCTCACTTGCTTACCAATCTGTGAGTCTT
ATTGCTGAGGGTGTCGCAGCTTTAACGTTGAGCGCGAAAAGTGTTGGGAGGTTAGAGTCG
ATGTACAACAGCGTGAAACCAATATCATTGTTTGGACATTCTATTGAACTTGCAAGACAG
GGAAAAATACCAGCGGGCACGAAAAGCTTTCCTTTTGAAATTCCATTAAAACCCCATGGA
AGCATTAAATGGTTGCTGGAAACTTATAGGGGAGTTTACATCTCTGTGCAGTACAACATC
AAGTGCCTGTTGAAACGACCATTGCTAAACAAGGATCTCACAAAAGAAACTGAGATTTAT
ATTGAGTATAAAAGTGGGGATAGAGCAAATAACAAACCTATAAAGTTTAACATTAATCCA
AACTCTATAAAGAATGCAAATTCACAAGCTGAGATCCCAAGATTCTCGGTCCGTGGTCGA
TTGGATTCTAGTGTTTGTTGCCTCACCAAACCAATGACAGGGGAACTTGTCGTCGAAGCT
TCGGAAAACCCGATCCGTTCAATCGAGTTGCAACTAATGAGAGTGGAAACTGTGGGAAGT
CCAGATGGTTTTGCTAAAGAAGCCACTGAGATCCAGAACATAGAGATTGGTTGTGGTGAT
GTATGCAGAGGACTGAGCATCCCTATCTTCATGATCTTCCCCAGGATGTTTGCTTGCCCT
ACAGTTGACACACCTAACTTTAAGATTGAGTTCGAACTTAACATTGTCATTGTGTTCGAA
GACGACAGAATGATTAGCGAAAACTTCCCAATTAAACTCACCAGATTTTAATGCTTGTGT
TGTAACTTGTGATTATAGGCATCAAACCTGGGGTGGCAGGGTGGACAGGCTAACCCTGGA
ATTTTCTGCACTGCATTAACCAGTAAACATTACAACCAATAAGTTAGATTTGTTTCACAT
GATTGTGTCTAAGTATCCCTGCCTCCCCTGTGTTTATAAACTTTGGTGCCTGTGCTTGCA
ACTCCCTATTAATGTGCAATACACTTCTGCTGATTTACATTGATTTTTCAAACCTTATGG
TGGCCAAGCAATGTCAGATTGGTCAATTTTGAGTGGCATACTGGTAAATAAATTTTTCAG
CAATTGAAATTAATTCAACCAAAAACACATCAATGCTGGACTTTAACTTGGTGTAATACA
ACATCCAGGTTTTGCTAAAATACAAGAATTTCAATTTTTGGGTCATTTTTTATAATTATT
TTCGCATGTATCTACATTAAATATAATTTGCAAATAAACTAAGAAAACACAAATTCA

InterProScan

PANTHER
Vps26-related (IPR028934) - T[1-295] 5.3E-116
Gene3D
Arrestin_C (IPR014752) - T[2-145] 2.1E-24 - T[175-296] 2.9E-12
SUPERFAMILY
Ig_E-set (IPR014756) - T[4-141] 3.78E-9
Pfam
Vps26-related (IPR028934) - T[11-282] 3.7E-42

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DSCR3_HUMAN 51.536 % 327 7.08E-113