- Transcript 'KH2012:KH.L38.6.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.L38.6.v1.A.SL1-1
Possible name(s)
OPN1LW; OPN1MW2; OPN1MW3
Gene model
Location
KhL38 [52,837 / 57,033]
Amino acid sequence
Length: 313
>KH.L38.6.v1.A.SL1-1
QLYNMTTAETTTECYEKNPYIRNEMGWVPKHILIAERHIYTILAVYMTFIFLLAVSLNGF
VIIATMKNKKLRQPLNYIIINLSIADFLSGLVGGFIGMISNSAGYFYFGKTVCILEGYIV
SVAGVCGLMSISVMAFERYFVVCKPYGPFTLTNTHAALGIGFTWTWSVLWSTPGLIWLDG
YVPEGLGTSCAPNWFSKNKSERIFIFVYFVFCFFIPLLVIIICYGKIVLFLKQATRQSSA
SSNRQADNKVTKMVLVMISAFLICWTPYGVLSLYNAINPDKQLDYGLGAVPVFFAKTANI
YNPLIYIGLNKQF
Nucleotide sequence
Length: 1,103
>KH2012:KH.L38.6.v1.A.SL1-1
ACAGCTATATAACATGACCACTGCTGAAACAACTACTGAATGTTATGAAAAGAACCCTTA
CATACGAAACGAAATGGGTTGGGTTCCCAAGCACATTTTGATTGCTGAACGTCACATCTA
CACGATACTTGCTGTCTATATGACGTTTATATTTCTGCTGGCAGTTTCACTCAACGGGTT
CGTGATAATTGCTACGATGAAAAACAAGAAACTTCGTCAACCTTTAAACTACATCATAAT
CAACTTATCAATCGCCGACTTTTTAAGCGGTTTGGTCGGCGGTTTCATCGGCATGATTTC
CAACAGCGCTGGTTATTTTTACTTCGGGAAAACGGTTTGTATCCTTGAAGGATATATCGT
CTCAGTAGCAGGTGTTTGCGGGCTTATGTCAATATCTGTCATGGCGTTTGAACGTTACTT
TGTTGTATGCAAGCCATATGGGCCCTTCACCCTAACGAACACTCACGCTGCGCTGGGGAT
CGGTTTCACTTGGACGTGGTCAGTATTGTGGAGCACACCGGGGTTAATATGGTTGGATGG
TTATGTGCCTGAAGGACTTGGGACAAGCTGTGCGCCAAACTGGTTCAGCAAAAATAAAAG
TGAACGTATCTTCATTTTCGTTTACTTCGTGTTCTGTTTCTTCATTCCATTATTGGTGAT
TATCATTTGTTACGGAAAGATCGTTTTATTTCTCAAACAAGCCACAAGGCAGAGCAGCGC
AAGCAGCAACCGGCAAGCGGATAATAAAGTTACAAAGATGGTTCTTGTCATGATATCTGC
ATTTCTTATATGTTGGACTCCATATGGGGTTTTATCGCTCTACAACGCGATTAATCCAGA
CAAGCAGCTCGACTACGGCCTTGGTGCCGTGCCAGTATTTTTTGCGAAGACAGCAAACAT
TTATAATCCTCTAATATACATTGGGCTCAACAAACAGTTTTGAATGTAACTTATTTATCC
TCGCAGGGCTGGGTAACGACAGTTGTTATAATACGGGTGTTCTGTTTCATACACCTCGTG
CCCGCTTACGAGTTACCACGTATGTAACTTTGTGAGTGATACCTTTTGGCTACATTTGTG
TACAGTTATTATTATTTCTCTAA
| PRINTS |
GPCR_Rhodpsn (IPR000276) - T[42-66] 4.0E-37 - T[75-96] 4.0E-37 - T[120-142] 4.0E-37 - T[155-176] 4.0E-37 - T[205-228] 4.0E-37 - T[250-274] 4.0E-37 - T[288-313] 4.0E-37 |
| ProSiteProfiles |
GPCR_Rhodpsn_7TM (IPR017452) - T[57-306] 38.045 |
| Pfam |
GPCR_Rhodpsn (IPR000276) - T[58-306] 5.4E-44 |
| ProSitePatterns |
GPCR_Rhodpsn (IPR000276) - T[126-142] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| OPSR_HUMAN | 40.283 % | 239 | 2.81E-77 |
| OPSG3_HUMAN | 39.929 % | 233 | 7.97E-75 |
| OPSG_HUMAN | 39.929 % | 233 | 7.97E-75 |