- Molecular Tool 'cieg43h01-MO (Hamada's MO)' >
- Transcript 'KH2012:KH.L4.29.v2.C...' >
- Transcript 'KH2012:KH.L4.29.v2.C...'
Transcript Model
Transcript Id
KH2012:KH.L4.29.v2.C.SL3-1
Possible name(s)
DLL1; SNED1
Gene model
Location
KhL4 [145,402 / 158,783]
Amino acid sequence
Length: 718
>KH.L4.29.v2.C.SL3-1
VNFSRFSLEYDVNCRYDYIQYVFDATNNRDLSKSKRFCGNGLDKINGGRLRGPGPLIMVF
VSDDSAAESGFKFSFEFELTGPDPCESNPCQHDGECESHPDYYTCKCSDGFAGINCEIDM
DECASYPCKHGGTCVDGVRDYTCDCLEGFTGKDCETPPDFCASNPCENGGLCVNRNVDFV
CSCPRDFMGEKCEEPAPEVTTQPPSPAPKEDEKAAPADHEPHPPGDANNHRTSVIIAVIL
VLLVLFLLLGIFLWYWFKLRKGNPQKREKEVTLINMKTKSEHGQGRSGHRLSRTTSINSV
TMKGDSRDGRLLNKLKKMSEDIIMEEVPDETNRPPHHIHPSNPYIAPVSSIPNTIPDTSN
LRKISIPVSQHELHGLGNHRMGPFQPTNIAPHDAIGLLNQLKQNNNNNMDFKSALSQYGI
PTYTPKPFPSYNMAPLAVANVANPQINPFQPEPSYPVDPSYPTDPSYPTQPDHSMELSAQ
EAAEVVNHLLRSEPNNGKPVTSQEAMEIIRHVRDKSYGEERPPMDREKSIVLHPHEVANI
FNKFRNRPTVTESDEPIRNEGGIASSYDPSDPGDRAPNRINREFRECSPIQEESSGGKHG
NPRVAWTPEADHEEPVVKRVRKKPKRFLCESSIDPDQKVHDWLESTPKVKGNKHKKHRSP
VNSVATDTVITRTLPTKVDRNNRHSPSNEEPPRAPRTIRQTRRMIPDKSMLPITGFLQ
Nucleotide sequence
Length: 2,722
>KH2012:KH.L4.29.v2.C.SL3-1
GTTAACTTCAGCAGATTCTCATTAGAGTATGACGTAAATTGTCGATATGATTATATCCAA
TACGTGTTCGACGCAACAAACAATAGAGATTTAAGTAAATCTAAAAGGTTCTGTGGGAAT
GGTTTGGACAAAATCAACGGAGGTCGACTCAGAGGACCTGGTCCCCTTATCATGGTGTTC
GTAAGCGATGACTCAGCTGCTGAGTCAGGGTTCAAATTCTCGTTCGAATTTGAGTTGACA
GGACCTGACCCTTGTGAGTCCAACCCATGTCAACACGACGGCGAATGTGAATCTCATCCT
GATTATTACACGTGCAAATGTTCTGATGGGTTTGCTGGGATTAATTGTGAAATAGATATG
GATGAATGTGCATCCTACCCATGCAAACACGGGGGAACTTGTGTGGACGGGGTGCGGGAT
TATACATGCGATTGTTTGGAGGGGTTCACAGGGAAGGATTGTGAAACACCTCCAGATTTC
TGTGCGTCCAATCCTTGTGAAAACGGAGGACTTTGCGTGAATCGCAATGTCGATTTTGTG
TGTTCGTGTCCGAGGGACTTCATGGGGGAGAAATGTGAAGAGCCAGCACCAGAAGTTACA
ACCCAGCCCCCCTCGCCCGCACCAAAGGAAGATGAAAAAGCAGCACCAGCCGACCATGAA
CCTCATCCACCTGGAGATGCAAACAACCATAGGACCTCTGTGATCATCGCTGTGATCCTC
GTGCTCCTCGTCCTCTTCCTCTTGCTCGGGATCTTTCTGTGGTATTGGTTCAAACTAAGG
AAGGGAAACCCCCAGAAGAGAGAAAAGGAAGTGACACTCATTAATATGAAAACTAAGTCC
GAACATGGGCAAGGTCGTTCCGGTCATCGATTATCGCGCACGACCTCGATCAACAGCGTT
ACTATGAAAGGGGATTCCCGGGATGGAAGATTGTTGAACAAACTGAAGAAAATGTCCGAG
GATATTATTATGGAAGAAGTGCCTGATGAAACGAACCGTCCTCCCCACCACATTCACCCC
AGCAACCCTTACATTGCCCCGGTGTCATCAATACCAAACACCATACCTGATACTTCAAAT
TTAAGGAAAATATCGATCCCAGTTTCGCAGCATGAACTCCATGGACTTGGTAACCATCGC
ATGGGTCCCTTCCAACCGACCAACATTGCCCCGCACGATGCGATCGGGCTGCTTAATCAA
CTCAAGCAAAATAACAACAATAATATGGATTTCAAATCAGCTTTGTCACAATATGGGATT
CCCACGTACACCCCCAAACCCTTCCCCTCATACAACATGGCCCCGTTAGCCGTAGCAAAC
GTAGCTAACCCCCAAATCAACCCCTTCCAACCTGAACCATCTTACCCCGTCGACCCATCT
TACCCCACTGACCCATCTTACCCCACCCAACCTGACCACTCGATGGAGTTAAGTGCGCAG
GAAGCTGCAGAAGTCGTCAATCATTTGTTACGAAGCGAGCCGAACAATGGGAAGCCTGTG
ACATCACAAGAGGCGATGGAGATAATTCGTCACGTTCGCGACAAATCTTACGGGGAAGAG
CGCCCCCCAATGGATCGAGAGAAGAGCATCGTTCTTCATCCACATGAGGTCGCTAACATT
TTCAATAAGTTCCGTAATCGTCCAACCGTGACCGAATCTGACGAACCAATCAGAAACGAG
GGAGGAATCGCAAGTTCTTACGATCCATCAGACCCAGGGGACCGAGCCCCGAACCGAATC
AACCGAGAGTTCCGTGAATGCTCCCCAATACAAGAGGAATCGAGCGGGGGTAAACATGGA
AACCCACGCGTTGCATGGACGCCAGAAGCCGACCATGAGGAACCAGTTGTTAAACGAGTT
CGTAAAAAGCCGAAGCGATTTTTGTGCGAGAGTTCAATTGACCCCGACCAGAAAGTCCAT
GATTGGCTGGAAAGCACACCGAAGGTTAAGGGCAACAAACACAAGAAACACCGTTCACCG
GTCAACTCGGTTGCCACAGATACCGTGATCACACGAACGTTGCCGACCAAAGTGGATCGG
AATAATAGGCATTCCCCAAGCAATGAGGAACCCCCAAGAGCCCCACGCACAATACGACAA
ACAAGACGGATGATTCCCGACAAATCAATGCTTCCAATTACAGGTTTCCTACAATAGGAA
AACAAAGCCAAGTCACTGGTTGAGAATTTGATCAAAGCTCCATTGCATAGCAGTCAGAAT
GTGGTGGGACCCGGATTGGGGGTTAACCGACAGAATGCATTCGTTGGCCCCAATAAAATT
GAAGCTTTCTAACTTCTAAGTGATTGAGACTTTCTGTGCCACTTCCATGCCCACAGTCAA
GTTGCTGAAGCTATTGCAGTGTGTGGATAAGCAGACATAACTTTTGGTTGATTTGGTCAT
TTATATCCTCATGGGTGGGAACTTGAGTGACTTATCCATGGTTGCCACTCCCATGCCCAC
AGTCGAGTTGCTGAAGCTATTGCAGTGTGTGGATAAGCAGACATGACTTTTGGTTGGTTT
GGTCATTTATATCCTCGTGGGTGGGAACTTGAGTGACTTATCCATGGTTGCCACTGCCAT
GCCCGCAGTCGAGTTGCTAAAGCTATTGCAGTGTGTGGATAAGCAGACATAACTTTTGGT
TGATTTGGTCATTTATATCCTCATGGGTGGGAACTTGAGTGACTTATCCATGGTTGCCAC
TCCCATGCCCGCAGTCGAGTTG
| Gene3D |
Sperma_CUB_dom_sf (IPR035914) - T[1-80] 1.1E-7 |
| CDD |
CUB_dom (IPR000859) - T[1-77] 8.91505E-9 |
| ProSiteProfiles |
CUB_dom (IPR000859) - T[1-78] 10.807 |
| SUPERFAMILY |
Sperma_CUB_dom_sf (IPR035914) - T[2-77] 8.11E-5 |
| Pfam |
CUB_dom (IPR000859) - T[2-75] 1.7E-4 |
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[81-117] 19.501 - T[119-155] 24.057 - T[157-193] 18.884 |
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[83-117] 0.015 - T[119-155] 3.3E-11 - T[159-193] 0.0053 |
| SMART |
EGF-like_dom (IPR000742) - T[84-117] 7.8E-4 - T[122-155] 2.4E-8 - T[160-193] 3.8E-6 |
| Pfam |
EGF-like_dom (IPR000742) - T[85-115] 2.3E-6 - T[123-152] 1.7E-10 |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[105-116] . - T[105-116] . - T[143-154] . - T[143-154] . - T[181-192] . |
| ProSitePatterns |
EGF_Ca-bd_CS (IPR018097) - T[119-143] . |
| ProSitePatterns |
EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[134-145] . - T[172-183] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FAT1_HUMAN | 33.854 % | 111 | 5.17E-25 |
| DLL1_HUMAN | 36.264 % | 122 | 9.62E-29 |
| SNED1_HUMAN | 45.528 % | 116 | 1.23E-26 |