- Transcript 'KH2012:KH.C5.42.v1.A...' >
- Transcript 'KH2012:KH.L4.55.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.L4.55.v1.A.nonSL25-1
Possible name(s)
CCT3; CCT4; CCT7
Gene model
Location
KhL4 [77,116 / 78,759]
Amino acid sequence
Length: 398
>KH.L4.55.v1.A.nonSL25-1
NRVMSAPVLVLNQNSKRESGRKVQLGNVAAAKTIADVIRTCLGPRSMLKMLMDPMGGIVM
TNDGNAILREITVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMMTAAEQFLEQNMHP
TVIIGAYRKALDDMQEILGEMSVEVDVNKKSEMRKIVKSAIGTKFINKRLRKSDNNRIAR
ACGATVCSRTEEIREEDIGTEAGLFEVRKFGEEYFTFITKCKNPKACTILLRGASKDVLM
EVERNLQDAMQVTRNVMINPQLLPGGGAVEMAVAQKMKALSKSMMGVEQWPYRAVADALE
IIPRTLIQNCGASTIRTITALRAKHADAGNETWGVNGESGQIADMNVLDVWEPLSVKLQT
YKTAMETAMLLLRIDDIVSGTKKAEGGEGTGTAAPTGA
Nucleotide sequence
Length: 1,199
>KH2012:KH.L4.55.v1.A.nonSL25-1
AGAACAGAGTCATGTCGGCGCCGGTGCTCGTTCTTAACCAGAATTCTAAGCGTGAATCGG
GACGCAAGGTCCAACTAGGTAATGTCGCAGCCGCTAAAACGATAGCTGACGTTATAAGAA
CATGTTTGGGTCCAAGGTCTATGCTGAAAATGCTAATGGACCCAATGGGTGGGATCGTGA
TGACAAATGATGGGAACGCCATCCTCCGTGAGATCACAGTCCAACATCCAGCAGCCAAGT
CCATGATAGAGATCAGCAGGACACAAGATGAGGAGGTGGGAGACGGGACAACCTCAGTGA
TCATCTTAGCAGGGGAGATGATGACAGCAGCTGAGCAGTTCCTGGAGCAGAATATGCATC
CAACAGTGATCATTGGTGCTTACCGGAAAGCTCTGGATGACATGCAAGAGATCTTAGGAG
AAATGAGCGTGGAAGTGGATGTGAACAAGAAGTCCGAGATGAGGAAGATAGTGAAGAGCG
CGATCGGGACGAAGTTCATCAATAAGAGACTTCGGAAGTCTGATAATAATCGTATCGCTC
GTGCCTGTGGCGCCACCGTGTGCTCAAGAACAGAGGAGATAAGAGAAGAGGACATAGGAA
CTGAGGCCGGGCTGTTTGAGGTCCGGAAGTTTGGTGAAGAGTATTTCACCTTCATCACTA
AATGCAAGAACCCGAAGGCGTGCACCATCTTGCTTCGTGGAGCGAGTAAAGATGTGTTAA
TGGAGGTTGAGAGGAATCTTCAGGATGCGATGCAGGTGACGAGGAACGTGATGATCAACC
CACAACTTCTACCAGGTGGTGGCGCTGTGGAGATGGCAGTTGCTCAAAAGATGAAGGCGC
TGTCGAAATCCATGATGGGGGTGGAGCAGTGGCCGTACCGAGCTGTCGCTGATGCATTGG
AGATTATACCGCGTACCTTGATACAGAATTGTGGTGCAAGCACAATACGTACGATCACCG
CACTCCGTGCTAAACATGCAGATGCTGGGAATGAAACATGGGGAGTGAACGGAGAATCTG
GGCAGATCGCGGATATGAACGTGCTCGATGTATGGGAACCTTTGTCTGTTAAACTTCAAA
CGTACAAGACAGCTATGGAGACCGCCATGCTATTGCTTAGAATTGATGATATTGTTTCTG
GAACTAAAAAGGCAGAAGGAGGGGAGGGAACTGGAACAGCCGCGCCCACTGGAGCATGA
| PANTHER |
Cpn60/TCP-1 (IPR002423) - T[9-168] 1.5E-198 - T[168-388] 1.5E-198 |
| SUPERFAMILY |
GROEL-like_equatorial_sf (IPR027413) - T[15-145] 1.14E-84 - T[260-380] 1.14E-84 |
| Gene3D |
GROEL-like_equatorial_sf (IPR027413) - T[27-145] 1.5E-55 - T[261-378] 7.3E-77 |
| Pfam |
Cpn60/TCP-1 (IPR002423) - T[34-168] 3.9E-49 - T[167-379] 4.3E-67 |
| PRINTS |
Chaperone_TCP-1 (IPR017998) - T[36-52] 1.4E-15 - T[58-76] 1.4E-15 - T[88-107] 1.4E-15 |
| ProSitePatterns |
Chaperonin_TCP-1_CS (IPR002194) - T[39-51] . - T[60-76] . - T[88-96] . |
| Gene3D |
TCP-1-like_intermed_sf (IPR027410) - T[146-167] 1.5E-55 - T[226-260] 7.3E-77 |
| SUPERFAMILY |
GroEL-like_apical_dom_sf (IPR027409) - T[166-233] 6.38E-16 |
| Gene3D |
GroEL-like_apical_dom_sf (IPR027409) - T[168-225] 7.3E-77 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TCPH_HUMAN | 32.766 % | 132 | 6.35E-34 |
| TCPG_HUMAN | 70.614 % | 348 | 4.18E-116 |
| TCPD_HUMAN | 38.816 % | 131 | 8.3E-34 |