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TRANSCRIPT CARD

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  1. Transcript 'Cisavi.CG.ENS81.R417...'
  2. Transcript 'KH2012:KH.C5.42.v1.A...'
  3. Transcript 'KH2012:KH.L4.55.v1.A...'

Transcript Model

Transcript Id

KH2012:KH.L4.55.v1.A.nonSL25-1

Possible name(s)

CCT3; CCT4; CCT7

Location

KhL4 [77,116 / 78,759]

Sequences

Amino acid sequence

Length: 398

>KH.L4.55.v1.A.nonSL25-1
NRVMSAPVLVLNQNSKRESGRKVQLGNVAAAKTIADVIRTCLGPRSMLKMLMDPMGGIVM
TNDGNAILREITVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMMTAAEQFLEQNMHP
TVIIGAYRKALDDMQEILGEMSVEVDVNKKSEMRKIVKSAIGTKFINKRLRKSDNNRIAR
ACGATVCSRTEEIREEDIGTEAGLFEVRKFGEEYFTFITKCKNPKACTILLRGASKDVLM
EVERNLQDAMQVTRNVMINPQLLPGGGAVEMAVAQKMKALSKSMMGVEQWPYRAVADALE
IIPRTLIQNCGASTIRTITALRAKHADAGNETWGVNGESGQIADMNVLDVWEPLSVKLQT
YKTAMETAMLLLRIDDIVSGTKKAEGGEGTGTAAPTGA

Nucleotide sequence

Length: 1,199

>KH2012:KH.L4.55.v1.A.nonSL25-1
AGAACAGAGTCATGTCGGCGCCGGTGCTCGTTCTTAACCAGAATTCTAAGCGTGAATCGG
GACGCAAGGTCCAACTAGGTAATGTCGCAGCCGCTAAAACGATAGCTGACGTTATAAGAA
CATGTTTGGGTCCAAGGTCTATGCTGAAAATGCTAATGGACCCAATGGGTGGGATCGTGA
TGACAAATGATGGGAACGCCATCCTCCGTGAGATCACAGTCCAACATCCAGCAGCCAAGT
CCATGATAGAGATCAGCAGGACACAAGATGAGGAGGTGGGAGACGGGACAACCTCAGTGA
TCATCTTAGCAGGGGAGATGATGACAGCAGCTGAGCAGTTCCTGGAGCAGAATATGCATC
CAACAGTGATCATTGGTGCTTACCGGAAAGCTCTGGATGACATGCAAGAGATCTTAGGAG
AAATGAGCGTGGAAGTGGATGTGAACAAGAAGTCCGAGATGAGGAAGATAGTGAAGAGCG
CGATCGGGACGAAGTTCATCAATAAGAGACTTCGGAAGTCTGATAATAATCGTATCGCTC
GTGCCTGTGGCGCCACCGTGTGCTCAAGAACAGAGGAGATAAGAGAAGAGGACATAGGAA
CTGAGGCCGGGCTGTTTGAGGTCCGGAAGTTTGGTGAAGAGTATTTCACCTTCATCACTA
AATGCAAGAACCCGAAGGCGTGCACCATCTTGCTTCGTGGAGCGAGTAAAGATGTGTTAA
TGGAGGTTGAGAGGAATCTTCAGGATGCGATGCAGGTGACGAGGAACGTGATGATCAACC
CACAACTTCTACCAGGTGGTGGCGCTGTGGAGATGGCAGTTGCTCAAAAGATGAAGGCGC
TGTCGAAATCCATGATGGGGGTGGAGCAGTGGCCGTACCGAGCTGTCGCTGATGCATTGG
AGATTATACCGCGTACCTTGATACAGAATTGTGGTGCAAGCACAATACGTACGATCACCG
CACTCCGTGCTAAACATGCAGATGCTGGGAATGAAACATGGGGAGTGAACGGAGAATCTG
GGCAGATCGCGGATATGAACGTGCTCGATGTATGGGAACCTTTGTCTGTTAAACTTCAAA
CGTACAAGACAGCTATGGAGACCGCCATGCTATTGCTTAGAATTGATGATATTGTTTCTG
GAACTAAAAAGGCAGAAGGAGGGGAGGGAACTGGAACAGCCGCGCCCACTGGAGCATGA

InterProScan

PANTHER
Cpn60/TCP-1 (IPR002423) - T[9-168] 1.5E-198 - T[168-388] 1.5E-198
SUPERFAMILY
GROEL-like_equatorial_sf (IPR027413) - T[15-145] 1.14E-84 - T[260-380] 1.14E-84
Gene3D
GROEL-like_equatorial_sf (IPR027413) - T[27-145] 1.5E-55 - T[261-378] 7.3E-77
Pfam
Cpn60/TCP-1 (IPR002423) - T[34-168] 3.9E-49 - T[167-379] 4.3E-67
PRINTS
Chaperone_TCP-1 (IPR017998) - T[36-52] 1.4E-15 - T[58-76] 1.4E-15 - T[88-107] 1.4E-15
ProSitePatterns
Chaperonin_TCP-1_CS (IPR002194) - T[39-51] . - T[60-76] . - T[88-96] .
Gene3D
TCP-1-like_intermed_sf (IPR027410) - T[146-167] 1.5E-55 - T[226-260] 7.3E-77
SUPERFAMILY
GroEL-like_apical_dom_sf (IPR027409) - T[166-233] 6.38E-16
Gene3D
GroEL-like_apical_dom_sf (IPR027409) - T[168-225] 7.3E-77

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TCPH_HUMAN 32.766 % 132 6.35E-34
TCPG_HUMAN 70.614 % 348 4.18E-116
TCPD_HUMAN 38.816 % 131 8.3E-34