- Transcript 'KH2012:KH.L4.55.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.L4.55.v1.A.nonSL33-1
Possible name(s)
CCT3; CCT4; CCT7
Gene model
Location
KhL4 [77,116 / 78,693]
Amino acid sequence
Length: 376
>KH.L4.55.v1.A.nonSL33-1
VQLGNVAAAKTIADVIRTCLGPRSMLKMLMDPMGGIVMTNDGNAILREITVQHPAAKSMI
EISRTQDEEVGDGTTSVIILAGEMMTAAEQFLEQNMHPTVIIGAYRKALDDMQEILGEMS
VEVDVNKKSEMRKIVKSAIGTKFINKRLRKSDNNRIARACGATVCSRTEEIREEDIGTEA
GLFEVRKFGEEYFTFITKCKNPKACTILLRGASKDVLMEVERNLQDAMQVTRNVMINPQL
LPGGGAVEMAVAQKMKALSKSMMGVEQWPYRAVADALEIIPRTLIQNCGASTIRTITALR
AKHADAGNETWGVNGESGQIADMNVLDVWEPLSVKLQTYKTAMETAMLLLRIDDIVSGTK
KAEGGEGTGTAAPTGA
Nucleotide sequence
Length: 1,133
>KH2012:KH.L4.55.v1.A.nonSL33-1
AGGTCCAACTAGGTAATGTCGCAGCCGCTAAAACGATAGCTGACGTTATAAGAACATGTT
TGGGTCCAAGGTCTATGCTGAAAATGCTAATGGACCCAATGGGTGGGATCGTGATGACAA
ATGATGGGAACGCCATCCTCCGTGAGATCACAGTCCAACATCCAGCAGCCAAGTCCATGA
TAGAGATCAGCAGGACACAAGATGAGGAGGTGGGAGACGGGACAACCTCAGTGATCATCT
TAGCAGGGGAGATGATGACAGCAGCTGAGCAGTTCCTGGAGCAGAATATGCATCCAACAG
TGATCATTGGTGCTTACCGGAAAGCTCTGGATGACATGCAAGAGATCTTAGGAGAAATGA
GCGTGGAAGTGGATGTGAACAAGAAGTCCGAGATGAGGAAGATAGTGAAGAGCGCGATCG
GGACGAAGTTCATCAATAAGAGACTTCGGAAGTCTGATAATAATCGTATCGCTCGTGCCT
GTGGCGCCACCGTGTGCTCAAGAACAGAGGAGATAAGAGAAGAGGACATAGGAACTGAGG
CCGGGCTGTTTGAGGTCCGGAAGTTTGGTGAAGAGTATTTCACCTTCATCACTAAATGCA
AGAACCCGAAGGCGTGCACCATCTTGCTTCGTGGAGCGAGTAAAGATGTGTTAATGGAGG
TTGAGAGGAATCTTCAGGATGCGATGCAGGTGACGAGGAACGTGATGATCAACCCACAAC
TTCTACCAGGTGGTGGCGCTGTGGAGATGGCAGTTGCTCAAAAGATGAAGGCGCTGTCGA
AATCCATGATGGGGGTGGAGCAGTGGCCGTACCGAGCTGTCGCTGATGCATTGGAGATTA
TACCGCGTACCTTGATACAGAATTGTGGTGCAAGCACAATACGTACGATCACCGCACTCC
GTGCTAAACATGCAGATGCTGGGAATGAAACATGGGGAGTGAACGGAGAATCTGGGCAGA
TCGCGGATATGAACGTGCTCGATGTATGGGAACCTTTGTCTGTTAAACTTCAAACGTACA
AGACAGCTATGGAGACCGCCATGCTATTGCTTAGAATTGATGATATTGTTTCTGGAACTA
AAAAGGCAGAAGGAGGGGAGGGAACTGGAACAGCCGCGCCCACTGGAGCATGA
| Gene3D |
GROEL-like_equatorial_sf (IPR027413) - T[1-142] 4.3E-49 - T[207-368] 8.9E-48 |
| PANTHER |
Cpn60/TCP-1 (IPR002423) - T[1-146] 3.9E-193 - T[146-366] 3.9E-193 |
| SUPERFAMILY |
GROEL-like_equatorial_sf (IPR027413) - T[2-123] 5.1E-83 - T[238-358] 5.1E-83 |
| Pfam |
Cpn60/TCP-1 (IPR002423) - T[12-146] 3.5E-49 - T[145-357] 3.7E-67 |
| PRINTS |
Chaperone_TCP-1 (IPR017998) - T[14-30] 1.2E-15 - T[36-54] 1.2E-15 - T[66-85] 1.2E-15 |
| ProSitePatterns |
Chaperonin_TCP-1_CS (IPR002194) - T[17-29] . - T[38-54] . - T[66-74] . |
| Gene3D |
GroEL-like_apical_dom_sf (IPR027409) - T[143-206] 1.1E-20 |
| SUPERFAMILY |
GroEL-like_apical_dom_sf (IPR027409) - T[144-211] 5.75E-16 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TCPH_HUMAN | 32.766 % | 132 | 3.8E-34 |
| TCPG_HUMAN | 70.614 % | 348 | 1.88E-116 |
| TCPD_HUMAN | 39.726 % | 130 | 2.26E-33 |