Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.L4.55.v1.A.nonSL34-1

Possible name(s)

CCT3; CCT4; CCT7

Gene model

KH2012:KH.L4.55

Location

KhL4 [77,116 / 78,706]

Sequences

Amino acid sequence

Length: 381

>KH.L4.55.v1.A.nonSL34-1
ESGRKVQLGNVAAAKTIADVIRTCLGPRSMLKMLMDPMGGIVMTNDGNAILREITVQHPA
AKSMIEISRTQDEEVGDGTTSVIILAGEMMTAAEQFLEQNMHPTVIIGAYRKALDDMQEI
LGEMSVEVDVNKKSEMRKIVKSAIGTKFINKRLRKSDNNRIARACGATVCSRTEEIREED
IGTEAGLFEVRKFGEEYFTFITKCKNPKACTILLRGASKDVLMEVERNLQDAMQVTRNVM
INPQLLPGGGAVEMAVAQKMKALSKSMMGVEQWPYRAVADALEIIPRTLIQNCGASTIRT
ITALRAKHADAGNETWGVNGESGQIADMNVLDVWEPLSVKLQTYKTAMETAMLLLRIDDI
VSGTKKAEGGEGTGTAAPTGA

Nucleotide sequence

Length: 1,146

>KH2012:KH.L4.55.v1.A.nonSL34-1
GAATCGGGACGCAAGGTCCAACTAGGTAATGTCGCAGCCGCTAAAACGATAGCTGACGTT
ATAAGAACATGTTTGGGTCCAAGGTCTATGCTGAAAATGCTAATGGACCCAATGGGTGGG
ATCGTGATGACAAATGATGGGAACGCCATCCTCCGTGAGATCACAGTCCAACATCCAGCA
GCCAAGTCCATGATAGAGATCAGCAGGACACAAGATGAGGAGGTGGGAGACGGGACAACC
TCAGTGATCATCTTAGCAGGGGAGATGATGACAGCAGCTGAGCAGTTCCTGGAGCAGAAT
ATGCATCCAACAGTGATCATTGGTGCTTACCGGAAAGCTCTGGATGACATGCAAGAGATC
TTAGGAGAAATGAGCGTGGAAGTGGATGTGAACAAGAAGTCCGAGATGAGGAAGATAGTG
AAGAGCGCGATCGGGACGAAGTTCATCAATAAGAGACTTCGGAAGTCTGATAATAATCGT
ATCGCTCGTGCCTGTGGCGCCACCGTGTGCTCAAGAACAGAGGAGATAAGAGAAGAGGAC
ATAGGAACTGAGGCCGGGCTGTTTGAGGTCCGGAAGTTTGGTGAAGAGTATTTCACCTTC
ATCACTAAATGCAAGAACCCGAAGGCGTGCACCATCTTGCTTCGTGGAGCGAGTAAAGAT
GTGTTAATGGAGGTTGAGAGGAATCTTCAGGATGCGATGCAGGTGACGAGGAACGTGATG
ATCAACCCACAACTTCTACCAGGTGGTGGCGCTGTGGAGATGGCAGTTGCTCAAAAGATG
AAGGCGCTGTCGAAATCCATGATGGGGGTGGAGCAGTGGCCGTACCGAGCTGTCGCTGAT
GCATTGGAGATTATACCGCGTACCTTGATACAGAATTGTGGTGCAAGCACAATACGTACG
ATCACCGCACTCCGTGCTAAACATGCAGATGCTGGGAATGAAACATGGGGAGTGAACGGA
GAATCTGGGCAGATCGCGGATATGAACGTGCTCGATGTATGGGAACCTTTGTCTGTTAAA
CTTCAAACGTACAAGACAGCTATGGAGACCGCCATGCTATTGCTTAGAATTGATGATATT
GTTTCTGGAACTAAAAAGGCAGAAGGAGGGGAGGGAACTGGAACAGCCGCGCCCACTGGA
GCATGA

InterProScan

PANTHER	Cpn60/TCP-1 (IPR002423) - T[1-151] 1.4E-195 - T[151-371] 1.4E-195
SUPERFAMILY	GROEL-like_equatorial_sf (IPR027413) - T[2-128] 5.76E-84 - T[243-363] 5.76E-84
Gene3D	GROEL-like_equatorial_sf (IPR027413) - T[10-128] 1.4E-55 - T[244-361] 6.5E-77
Pfam	Cpn60/TCP-1 (IPR002423) - T[17-151] 3.6E-49 - T[150-362] 3.8E-67
PRINTS	Chaperone_TCP-1 (IPR017998) - T[19-35] 1.2E-15 - T[41-59] 1.2E-15 - T[71-90] 1.2E-15
ProSitePatterns	Chaperonin_TCP-1_CS (IPR002194) - T[22-34] . - T[43-59] . - T[71-79] .
Gene3D	TCP-1-like_intermed_sf (IPR027410) - T[129-150] 1.4E-55 - T[209-243] 6.5E-77
SUPERFAMILY	GroEL-like_apical_dom_sf (IPR027409) - T[149-216] 5.96E-16
Gene3D	GroEL-like_apical_dom_sf (IPR027409) - T[151-208] 6.5E-77

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
TCPH_HUMAN	32.766 %	132	4.05E-34
TCPG_HUMAN	70.614 %	348	2.76E-116
TCPD_HUMAN	39.456 %	130	1.81E-33