- Transcript 'KH2012:KH.L4.55.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.L4.55.v1.A.nonSL36-1
Possible name(s)
CCT3; CCT4; CCT7
Gene model
Location
KhL4 [77,116 / 78,720]
Amino acid sequence
Length: 385
>KH.L4.55.v1.A.nonSL36-1
NSKRESGRKVQLGNVAAAKTIADVIRTCLGPRSMLKMLMDPMGGIVMTNDGNAILREITV
QHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMMTAAEQFLEQNMHPTVIIGAYRKALDD
MQEILGEMSVEVDVNKKSEMRKIVKSAIGTKFINKRLRKSDNNRIARACGATVCSRTEEI
REEDIGTEAGLFEVRKFGEEYFTFITKCKNPKACTILLRGASKDVLMEVERNLQDAMQVT
RNVMINPQLLPGGGAVEMAVAQKMKALSKSMMGVEQWPYRAVADALEIIPRTLIQNCGAS
TIRTITALRAKHADAGNETWGVNGESGQIADMNVLDVWEPLSVKLQTYKTAMETAMLLLR
IDDIVSGTKKAEGGEGTGTAAPTGA
Nucleotide sequence
Length: 1,160
>KH2012:KH.L4.55.v1.A.nonSL36-1
AGAATTCTAAGCGTGAATCGGGACGCAAGGTCCAACTAGGTAATGTCGCAGCCGCTAAAA
CGATAGCTGACGTTATAAGAACATGTTTGGGTCCAAGGTCTATGCTGAAAATGCTAATGG
ACCCAATGGGTGGGATCGTGATGACAAATGATGGGAACGCCATCCTCCGTGAGATCACAG
TCCAACATCCAGCAGCCAAGTCCATGATAGAGATCAGCAGGACACAAGATGAGGAGGTGG
GAGACGGGACAACCTCAGTGATCATCTTAGCAGGGGAGATGATGACAGCAGCTGAGCAGT
TCCTGGAGCAGAATATGCATCCAACAGTGATCATTGGTGCTTACCGGAAAGCTCTGGATG
ACATGCAAGAGATCTTAGGAGAAATGAGCGTGGAAGTGGATGTGAACAAGAAGTCCGAGA
TGAGGAAGATAGTGAAGAGCGCGATCGGGACGAAGTTCATCAATAAGAGACTTCGGAAGT
CTGATAATAATCGTATCGCTCGTGCCTGTGGCGCCACCGTGTGCTCAAGAACAGAGGAGA
TAAGAGAAGAGGACATAGGAACTGAGGCCGGGCTGTTTGAGGTCCGGAAGTTTGGTGAAG
AGTATTTCACCTTCATCACTAAATGCAAGAACCCGAAGGCGTGCACCATCTTGCTTCGTG
GAGCGAGTAAAGATGTGTTAATGGAGGTTGAGAGGAATCTTCAGGATGCGATGCAGGTGA
CGAGGAACGTGATGATCAACCCACAACTTCTACCAGGTGGTGGCGCTGTGGAGATGGCAG
TTGCTCAAAAGATGAAGGCGCTGTCGAAATCCATGATGGGGGTGGAGCAGTGGCCGTACC
GAGCTGTCGCTGATGCATTGGAGATTATACCGCGTACCTTGATACAGAATTGTGGTGCAA
GCACAATACGTACGATCACCGCACTCCGTGCTAAACATGCAGATGCTGGGAATGAAACAT
GGGGAGTGAACGGAGAATCTGGGCAGATCGCGGATATGAACGTGCTCGATGTATGGGAAC
CTTTGTCTGTTAAACTTCAAACGTACAAGACAGCTATGGAGACCGCCATGCTATTGCTTA
GAATTGATGATATTGTTTCTGGAACTAAAAAGGCAGAAGGAGGGGAGGGAACTGGAACAG
CCGCGCCCACTGGAGCATGA
| PANTHER |
Cpn60/TCP-1 (IPR002423) - T[1-155] 2.3E-197 - T[155-375] 2.3E-197 |
| SUPERFAMILY |
GROEL-like_equatorial_sf (IPR027413) - T[2-132] 9.94E-85 - T[247-367] 9.94E-85 |
| Gene3D |
GROEL-like_equatorial_sf (IPR027413) - T[14-132] 1.4E-55 - T[248-365] 6.7E-77 |
| Pfam |
Cpn60/TCP-1 (IPR002423) - T[21-155] 3.7E-49 - T[154-366] 3.9E-67 |
| PRINTS |
Chaperone_TCP-1 (IPR017998) - T[23-39] 1.3E-15 - T[45-63] 1.3E-15 - T[75-94] 1.3E-15 |
| ProSitePatterns |
Chaperonin_TCP-1_CS (IPR002194) - T[26-38] . - T[47-63] . - T[75-83] . |
| Gene3D |
TCP-1-like_intermed_sf (IPR027410) - T[133-154] 1.4E-55 - T[213-247] 6.7E-77 |
| SUPERFAMILY |
GroEL-like_apical_dom_sf (IPR027409) - T[153-220] 6.07E-16 |
| Gene3D |
GroEL-like_apical_dom_sf (IPR027409) - T[155-212] 6.7E-77 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TCPH_HUMAN | 32.766 % | 132 | 4.27E-34 |
| TCPG_HUMAN | 70.614 % | 348 | 4.17E-116 |
| TCPD_HUMAN | 38.816 % | 131 | 7.65E-34 |