- Transcript 'KH2012:KH.L4.55.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.L4.55.v1.A.nonSL39-1
Possible name(s)
CCT3; CCT4; CCT7
Gene model
Location
KhL4 [77,116 / 78,776]
Amino acid sequence
Length: 399
>KH.L4.55.v1.A.nonSL39-1
QNRVMSAPVLVLNQNSKRESGRKVQLGNVAAAKTIADVIRTCLGPRSMLKMLMDPMGGIV
MTNDGNAILREITVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMMTAAEQFLEQNMH
PTVIIGAYRKALDDMQEILGEMSVEVDVNKKSEMRKIVKSAIGTKFINKRLRKSDNNRIA
RACGATVCSRTEEIREEDIGTEAGLFEVRKFGEEYFTFITKCKNPKACTILLRGASKDVL
MEVERNLQDAMQVTRNVMINPQLLPGGGAVEMAVAQKMKALSKSMMGVEQWPYRAVADAL
EIIPRTLIQNCGASTIRTITALRAKHADAGNETWGVNGESGQIADMNVLDVWEPLSVKLQ
TYKTAMETAMLLLRIDDIVSGTKKAEGGEGTGTAAPTGA
Nucleotide sequence
Length: 1,216
>KH2012:KH.L4.55.v1.A.nonSL39-1
GGCATTATCTTCGTAACAGAACAGAGTCATGTCGGCGCCGGTGCTCGTTCTTAACCAGAA
TTCTAAGCGTGAATCGGGACGCAAGGTCCAACTAGGTAATGTCGCAGCCGCTAAAACGAT
AGCTGACGTTATAAGAACATGTTTGGGTCCAAGGTCTATGCTGAAAATGCTAATGGACCC
AATGGGTGGGATCGTGATGACAAATGATGGGAACGCCATCCTCCGTGAGATCACAGTCCA
ACATCCAGCAGCCAAGTCCATGATAGAGATCAGCAGGACACAAGATGAGGAGGTGGGAGA
CGGGACAACCTCAGTGATCATCTTAGCAGGGGAGATGATGACAGCAGCTGAGCAGTTCCT
GGAGCAGAATATGCATCCAACAGTGATCATTGGTGCTTACCGGAAAGCTCTGGATGACAT
GCAAGAGATCTTAGGAGAAATGAGCGTGGAAGTGGATGTGAACAAGAAGTCCGAGATGAG
GAAGATAGTGAAGAGCGCGATCGGGACGAAGTTCATCAATAAGAGACTTCGGAAGTCTGA
TAATAATCGTATCGCTCGTGCCTGTGGCGCCACCGTGTGCTCAAGAACAGAGGAGATAAG
AGAAGAGGACATAGGAACTGAGGCCGGGCTGTTTGAGGTCCGGAAGTTTGGTGAAGAGTA
TTTCACCTTCATCACTAAATGCAAGAACCCGAAGGCGTGCACCATCTTGCTTCGTGGAGC
GAGTAAAGATGTGTTAATGGAGGTTGAGAGGAATCTTCAGGATGCGATGCAGGTGACGAG
GAACGTGATGATCAACCCACAACTTCTACCAGGTGGTGGCGCTGTGGAGATGGCAGTTGC
TCAAAAGATGAAGGCGCTGTCGAAATCCATGATGGGGGTGGAGCAGTGGCCGTACCGAGC
TGTCGCTGATGCATTGGAGATTATACCGCGTACCTTGATACAGAATTGTGGTGCAAGCAC
AATACGTACGATCACCGCACTCCGTGCTAAACATGCAGATGCTGGGAATGAAACATGGGG
AGTGAACGGAGAATCTGGGCAGATCGCGGATATGAACGTGCTCGATGTATGGGAACCTTT
GTCTGTTAAACTTCAAACGTACAAGACAGCTATGGAGACCGCCATGCTATTGCTTAGAAT
TGATGATATTGTTTCTGGAACTAAAAAGGCAGAAGGAGGGGAGGGAACTGGAACAGCCGC
GCCCACTGGAGCATGA
| PANTHER |
Cpn60/TCP-1 (IPR002423) - T[10-169] 1.5E-198 - T[169-389] 1.5E-198 |
| SUPERFAMILY |
GROEL-like_equatorial_sf (IPR027413) - T[16-146] 1.15E-84 - T[261-381] 1.15E-84 |
| Gene3D |
GROEL-like_equatorial_sf (IPR027413) - T[28-146] 1.6E-55 - T[262-379] 7.4E-77 |
| Pfam |
Cpn60/TCP-1 (IPR002423) - T[35-169] 3.9E-49 - T[168-380] 4.3E-67 |
| PRINTS |
Chaperone_TCP-1 (IPR017998) - T[37-53] 1.4E-15 - T[59-77] 1.4E-15 - T[89-108] 1.4E-15 |
| ProSitePatterns |
Chaperonin_TCP-1_CS (IPR002194) - T[40-52] . - T[61-77] . - T[89-97] . |
| Gene3D |
TCP-1-like_intermed_sf (IPR027410) - T[147-168] 1.6E-55 - T[227-261] 7.4E-77 |
| SUPERFAMILY |
GroEL-like_apical_dom_sf (IPR027409) - T[167-234] 6.38E-16 |
| Gene3D |
GroEL-like_apical_dom_sf (IPR027409) - T[169-226] 7.4E-77 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TCPH_HUMAN | 32.766 % | 132 | 6.04E-34 |
| TCPG_HUMAN | 70.614 % | 348 | 3.6E-116 |
| TCPD_HUMAN | 38.816 % | 131 | 9.07E-34 |