- Transcript 'KH2012:KH.L4.55.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.L4.55.v1.A.nonSL40-1
Possible name(s)
CCT3; CCT4; CCT7
Gene model
Location
KhL4 [77,116 / 78,687]
Amino acid sequence
Length: 374
>KH.L4.55.v1.A.nonSL40-1
LGNVAAAKTIADVIRTCLGPRSMLKMLMDPMGGIVMTNDGNAILREITVQHPAAKSMIEI
SRTQDEEVGDGTTSVIILAGEMMTAAEQFLEQNMHPTVIIGAYRKALDDMQEILGEMSVE
VDVNKKSEMRKIVKSAIGTKFINKRLRKSDNNRIARACGATVCSRTEEIREEDIGTEAGL
FEVRKFGEEYFTFITKCKNPKACTILLRGASKDVLMEVERNLQDAMQVTRNVMINPQLLP
GGGAVEMAVAQKMKALSKSMMGVEQWPYRAVADALEIIPRTLIQNCGASTIRTITALRAK
HADAGNETWGVNGESGQIADMNVLDVWEPLSVKLQTYKTAMETAMLLLRIDDIVSGTKKA
EGGEGTGTAAPTGA
Nucleotide sequence
Length: 1,127
>KH2012:KH.L4.55.v1.A.nonSL40-1
AACTAGGTAATGTCGCAGCCGCTAAAACGATAGCTGACGTTATAAGAACATGTTTGGGTC
CAAGGTCTATGCTGAAAATGCTAATGGACCCAATGGGTGGGATCGTGATGACAAATGATG
GGAACGCCATCCTCCGTGAGATCACAGTCCAACATCCAGCAGCCAAGTCCATGATAGAGA
TCAGCAGGACACAAGATGAGGAGGTGGGAGACGGGACAACCTCAGTGATCATCTTAGCAG
GGGAGATGATGACAGCAGCTGAGCAGTTCCTGGAGCAGAATATGCATCCAACAGTGATCA
TTGGTGCTTACCGGAAAGCTCTGGATGACATGCAAGAGATCTTAGGAGAAATGAGCGTGG
AAGTGGATGTGAACAAGAAGTCCGAGATGAGGAAGATAGTGAAGAGCGCGATCGGGACGA
AGTTCATCAATAAGAGACTTCGGAAGTCTGATAATAATCGTATCGCTCGTGCCTGTGGCG
CCACCGTGTGCTCAAGAACAGAGGAGATAAGAGAAGAGGACATAGGAACTGAGGCCGGGC
TGTTTGAGGTCCGGAAGTTTGGTGAAGAGTATTTCACCTTCATCACTAAATGCAAGAACC
CGAAGGCGTGCACCATCTTGCTTCGTGGAGCGAGTAAAGATGTGTTAATGGAGGTTGAGA
GGAATCTTCAGGATGCGATGCAGGTGACGAGGAACGTGATGATCAACCCACAACTTCTAC
CAGGTGGTGGCGCTGTGGAGATGGCAGTTGCTCAAAAGATGAAGGCGCTGTCGAAATCCA
TGATGGGGGTGGAGCAGTGGCCGTACCGAGCTGTCGCTGATGCATTGGAGATTATACCGC
GTACCTTGATACAGAATTGTGGTGCAAGCACAATACGTACGATCACCGCACTCCGTGCTA
AACATGCAGATGCTGGGAATGAAACATGGGGAGTGAACGGAGAATCTGGGCAGATCGCGG
ATATGAACGTGCTCGATGTATGGGAACCTTTGTCTGTTAAACTTCAAACGTACAAGACAG
CTATGGAGACCGCCATGCTATTGCTTAGAATTGATGATATTGTTTCTGGAACTAAAAAGG
CAGAAGGAGGGGAGGGAACTGGAACAGCCGCGCCCACTGGAGCATGA
| PANTHER |
Cpn60/TCP-1 (IPR002423) - T[2-144] 4.8E-192 - T[144-364] 4.8E-192 |
| Gene3D |
GROEL-like_equatorial_sf (IPR027413) - T[3-121] 1.4E-55 - T[237-354] 6.2E-77 |
| SUPERFAMILY |
GROEL-like_equatorial_sf (IPR027413) - T[3-121] 1.02E-82 - T[236-356] 1.02E-82 |
| Pfam |
Cpn60/TCP-1 (IPR002423) - T[10-144] 3.4E-49 - T[143-355] 3.6E-67 |
| PRINTS |
Chaperone_TCP-1 (IPR017998) - T[12-28] 1.2E-15 - T[34-52] 1.2E-15 - T[64-83] 1.2E-15 |
| ProSitePatterns |
Chaperonin_TCP-1_CS (IPR002194) - T[15-27] . - T[36-52] . - T[64-72] . |
| Gene3D |
TCP-1-like_intermed_sf (IPR027410) - T[122-143] 1.4E-55 - T[202-236] 6.2E-77 |
| SUPERFAMILY |
GroEL-like_apical_dom_sf (IPR027409) - T[142-209] 5.75E-16 |
| Gene3D |
GroEL-like_apical_dom_sf (IPR027409) - T[144-201] 6.2E-77 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TCPH_HUMAN | 32.766 % | 132 | 3.57E-34 |
| TCPG_HUMAN | 70.614 % | 348 | 1.81E-116 |
| TCPD_HUMAN | 40.278 % | 128 | 7.49E-33 |