- Transcript 'Phmamm.CG.MTP2014.S6...' >
- Transcript 'KH2012:KH.L4.55.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.L4.55.v1.A.nonSL43-1
Possible name(s)
CCT3; CCT4; CCT7
Gene model
Location
KhL4 [77,116 / 78,726]
Amino acid sequence
Length: 387
>KH.L4.55.v1.A.nonSL43-1
NQNSKRESGRKVQLGNVAAAKTIADVIRTCLGPRSMLKMLMDPMGGIVMTNDGNAILREI
TVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMMTAAEQFLEQNMHPTVIIGAYRKAL
DDMQEILGEMSVEVDVNKKSEMRKIVKSAIGTKFINKRLRKSDNNRIARACGATVCSRTE
EIREEDIGTEAGLFEVRKFGEEYFTFITKCKNPKACTILLRGASKDVLMEVERNLQDAMQ
VTRNVMINPQLLPGGGAVEMAVAQKMKALSKSMMGVEQWPYRAVADALEIIPRTLIQNCG
ASTIRTITALRAKHADAGNETWGVNGESGQIADMNVLDVWEPLSVKLQTYKTAMETAMLL
LRIDDIVSGTKKAEGGEGTGTAAPTGA
Nucleotide sequence
Length: 1,166
>KH2012:KH.L4.55.v1.A.nonSL43-1
TTAACCAGAATTCTAAGCGTGAATCGGGACGCAAGGTCCAACTAGGTAATGTCGCAGCCG
CTAAAACGATAGCTGACGTTATAAGAACATGTTTGGGTCCAAGGTCTATGCTGAAAATGC
TAATGGACCCAATGGGTGGGATCGTGATGACAAATGATGGGAACGCCATCCTCCGTGAGA
TCACAGTCCAACATCCAGCAGCCAAGTCCATGATAGAGATCAGCAGGACACAAGATGAGG
AGGTGGGAGACGGGACAACCTCAGTGATCATCTTAGCAGGGGAGATGATGACAGCAGCTG
AGCAGTTCCTGGAGCAGAATATGCATCCAACAGTGATCATTGGTGCTTACCGGAAAGCTC
TGGATGACATGCAAGAGATCTTAGGAGAAATGAGCGTGGAAGTGGATGTGAACAAGAAGT
CCGAGATGAGGAAGATAGTGAAGAGCGCGATCGGGACGAAGTTCATCAATAAGAGACTTC
GGAAGTCTGATAATAATCGTATCGCTCGTGCCTGTGGCGCCACCGTGTGCTCAAGAACAG
AGGAGATAAGAGAAGAGGACATAGGAACTGAGGCCGGGCTGTTTGAGGTCCGGAAGTTTG
GTGAAGAGTATTTCACCTTCATCACTAAATGCAAGAACCCGAAGGCGTGCACCATCTTGC
TTCGTGGAGCGAGTAAAGATGTGTTAATGGAGGTTGAGAGGAATCTTCAGGATGCGATGC
AGGTGACGAGGAACGTGATGATCAACCCACAACTTCTACCAGGTGGTGGCGCTGTGGAGA
TGGCAGTTGCTCAAAAGATGAAGGCGCTGTCGAAATCCATGATGGGGGTGGAGCAGTGGC
CGTACCGAGCTGTCGCTGATGCATTGGAGATTATACCGCGTACCTTGATACAGAATTGTG
GTGCAAGCACAATACGTACGATCACCGCACTCCGTGCTAAACATGCAGATGCTGGGAATG
AAACATGGGGAGTGAACGGAGAATCTGGGCAGATCGCGGATATGAACGTGCTCGATGTAT
GGGAACCTTTGTCTGTTAAACTTCAAACGTACAAGACAGCTATGGAGACCGCCATGCTAT
TGCTTAGAATTGATGATATTGTTTCTGGAACTAAAAAGGCAGAAGGAGGGGAGGGAACTG
GAACAGCCGCGCCCACTGGAGCATGA
| PANTHER |
Cpn60/TCP-1 (IPR002423) - T[2-157] 6.1E-198 - T[157-377] 6.1E-198 |
| SUPERFAMILY |
GROEL-like_equatorial_sf (IPR027413) - T[4-134] 1.02E-84 - T[249-369] 1.02E-84 |
| Gene3D |
GROEL-like_equatorial_sf (IPR027413) - T[16-134] 1.5E-55 - T[250-367] 6.8E-77 |
| Pfam |
Cpn60/TCP-1 (IPR002423) - T[23-157] 3.7E-49 - T[156-368] 4.0E-67 |
| PRINTS |
Chaperone_TCP-1 (IPR017998) - T[25-41] 1.3E-15 - T[47-65] 1.3E-15 - T[77-96] 1.3E-15 |
| ProSitePatterns |
Chaperonin_TCP-1_CS (IPR002194) - T[28-40] . - T[49-65] . - T[77-85] . |
| Gene3D |
TCP-1-like_intermed_sf (IPR027410) - T[135-156] 1.5E-55 - T[215-249] 6.8E-77 |
| SUPERFAMILY |
GroEL-like_apical_dom_sf (IPR027409) - T[155-222] 6.07E-16 |
| Gene3D |
GroEL-like_apical_dom_sf (IPR027409) - T[157-214] 6.8E-77 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TCPH_HUMAN | 32.766 % | 132 | 4.81E-34 |
| TCPG_HUMAN | 70.614 % | 348 | 2.93E-116 |
| TCPD_HUMAN | 38.816 % | 131 | 7.97E-34 |