- Transcript 'KH2012:KH.C2.141.v1....' >
- Transcript 'KH2012:KH.L172.26.v1...' >
- Transcript 'KH2012:KH.C4.420.v1....' >
- Transcript 'KH2012:KH.C8.97.v1.A...' >
- Transcript 'KH2012:KH.L4.55.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.L4.55.v1.A.nonSL50-1
Possible name(s)
CCT3; CCT4; CCT7
Gene model
Location
KhL4 [77,116 / 78,727]
Amino acid sequence
Length: 388
>KH.L4.55.v1.A.nonSL50-1
LNQNSKRESGRKVQLGNVAAAKTIADVIRTCLGPRSMLKMLMDPMGGIVMTNDGNAILRE
ITVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMMTAAEQFLEQNMHPTVIIGAYRKA
LDDMQEILGEMSVEVDVNKKSEMRKIVKSAIGTKFINKRLRKSDNNRIARACGATVCSRT
EEIREEDIGTEAGLFEVRKFGEEYFTFITKCKNPKACTILLRGASKDVLMEVERNLQDAM
QVTRNVMINPQLLPGGGAVEMAVAQKMKALSKSMMGVEQWPYRAVADALEIIPRTLIQNC
GASTIRTITALRAKHADAGNETWGVNGESGQIADMNVLDVWEPLSVKLQTYKTAMETAML
LLRIDDIVSGTKKAEGGEGTGTAAPTGA
Nucleotide sequence
Length: 1,167
>KH2012:KH.L4.55.v1.A.nonSL50-1
CTTAACCAGAATTCTAAGCGTGAATCGGGACGCAAGGTCCAACTAGGTAATGTCGCAGCC
GCTAAAACGATAGCTGACGTTATAAGAACATGTTTGGGTCCAAGGTCTATGCTGAAAATG
CTAATGGACCCAATGGGTGGGATCGTGATGACAAATGATGGGAACGCCATCCTCCGTGAG
ATCACAGTCCAACATCCAGCAGCCAAGTCCATGATAGAGATCAGCAGGACACAAGATGAG
GAGGTGGGAGACGGGACAACCTCAGTGATCATCTTAGCAGGGGAGATGATGACAGCAGCT
GAGCAGTTCCTGGAGCAGAATATGCATCCAACAGTGATCATTGGTGCTTACCGGAAAGCT
CTGGATGACATGCAAGAGATCTTAGGAGAAATGAGCGTGGAAGTGGATGTGAACAAGAAG
TCCGAGATGAGGAAGATAGTGAAGAGCGCGATCGGGACGAAGTTCATCAATAAGAGACTT
CGGAAGTCTGATAATAATCGTATCGCTCGTGCCTGTGGCGCCACCGTGTGCTCAAGAACA
GAGGAGATAAGAGAAGAGGACATAGGAACTGAGGCCGGGCTGTTTGAGGTCCGGAAGTTT
GGTGAAGAGTATTTCACCTTCATCACTAAATGCAAGAACCCGAAGGCGTGCACCATCTTG
CTTCGTGGAGCGAGTAAAGATGTGTTAATGGAGGTTGAGAGGAATCTTCAGGATGCGATG
CAGGTGACGAGGAACGTGATGATCAACCCACAACTTCTACCAGGTGGTGGCGCTGTGGAG
ATGGCAGTTGCTCAAAAGATGAAGGCGCTGTCGAAATCCATGATGGGGGTGGAGCAGTGG
CCGTACCGAGCTGTCGCTGATGCATTGGAGATTATACCGCGTACCTTGATACAGAATTGT
GGTGCAAGCACAATACGTACGATCACCGCACTCCGTGCTAAACATGCAGATGCTGGGAAT
GAAACATGGGGAGTGAACGGAGAATCTGGGCAGATCGCGGATATGAACGTGCTCGATGTA
TGGGAACCTTTGTCTGTTAAACTTCAAACGTACAAGACAGCTATGGAGACCGCCATGCTA
TTGCTTAGAATTGATGATATTGTTTCTGGAACTAAAAAGGCAGAAGGAGGGGAGGGAACT
GGAACAGCCGCGCCCACTGGAGCATGA
| PANTHER |
Cpn60/TCP-1 (IPR002423) - T[2-158] 4.5E-198 - T[158-378] 4.5E-198 |
| SUPERFAMILY |
GROEL-like_equatorial_sf (IPR027413) - T[5-135] 1.03E-84 - T[250-370] 1.03E-84 |
| Gene3D |
GROEL-like_equatorial_sf (IPR027413) - T[17-135] 1.5E-55 - T[251-368] 6.9E-77 |
| Pfam |
Cpn60/TCP-1 (IPR002423) - T[24-158] 3.7E-49 - T[157-369] 4.0E-67 |
| PRINTS |
Chaperone_TCP-1 (IPR017998) - T[26-42] 1.3E-15 - T[48-66] 1.3E-15 - T[78-97] 1.3E-15 |
| ProSitePatterns |
Chaperonin_TCP-1_CS (IPR002194) - T[29-41] . - T[50-66] . - T[78-86] . |
| Gene3D |
TCP-1-like_intermed_sf (IPR027410) - T[136-157] 1.5E-55 - T[216-250] 6.9E-77 |
| SUPERFAMILY |
GroEL-like_apical_dom_sf (IPR027409) - T[156-223] 6.07E-16 |
| Gene3D |
GroEL-like_apical_dom_sf (IPR027409) - T[158-215] 6.9E-77 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TCPH_HUMAN | 32.766 % | 132 | 4.67E-34 |
| TCPG_HUMAN | 70.614 % | 348 | 2.79E-116 |
| TCPD_HUMAN | 38.816 % | 131 | 7.74E-34 |