- Transcript 'Moocci.CG.ELv1_2.S63...' >
- Molecular Tool 'Tbx6b/c/d-MO (Imai's 25mer MO)' >
- Transcript 'KH2012:KH.L5.2.v1.A....'
Transcript Model
Transcript Id
KH2012:KH.L5.2.v1.A.nonSL12-1
Possible name(s)
PSMC1; PSMC4
Gene model
Location
KhL5 [83,607 / 89,013]
Amino acid sequence
Length: 451
>KH.L5.2.v1.A.nonSL12-1
KLFRWTYSMGQNQSGGGRNGAGDNKKGDKGKEKKKYERPLPTRVGKRRKKAKGPDAANKL
PSVTPHTRCRLRLLKQERIKDYLLMEEEYIRNQERLKPQEEKQEEERTKVDDLRGSPMSV
GTLEEIIDENHAIVSTSVGSEHYVSILSFVDKDLLEPGCTVLMNHKVHAVVGFLGDDVDP
LVTVMKLEKAPKESYADIGGLDTQITEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPG
TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDA
IGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRAGRIDR
KIEFPMPDEKTKRRIFNIHTARMTLSDDVNVDEHVQAKDDLSGADIKAICTEAGLLALRE
RRMKVTSEDFKKSKENVLYRKNEGAPQGLYL
Nucleotide sequence
Length: 1,687
>KH2012:KH.L5.2.v1.A.nonSL12-1
ATTTACGAAATTAATTTGAAAGCTTTTCCGGTGGACCTATTCAATGGGCCAAAATCAAAG
TGGGGGAGGCCGGAATGGTGCCGGGGATAACAAGAAAGGGGACAAGGGGAAAGAGAAAAA
GAAATATGAACGACCTCTGCCGACAAGAGTTGGTAAACGTAGAAAGAAGGCAAAAGGACC
AGATGCCGCTAACAAGTTGCCCAGTGTAACTCCTCATACCCGGTGTCGGCTTCGTCTTTT
AAAACAAGAACGCATCAAGGATTATCTTTTAATGGAGGAGGAATACATCAGGAACCAGGA
GCGCCTCAAGCCACAAGAAGAAAAGCAAGAGGAAGAACGCACAAAAGTCGATGATTTGAG
AGGTTCTCCCATGTCGGTTGGAACGCTGGAGGAAATTATCGATGAAAATCACGCCATTGT
TTCAACTTCTGTGGGATCCGAACATTACGTTAGCATCTTGTCGTTTGTTGACAAAGATTT
GCTGGAACCAGGATGTACAGTGCTCATGAATCATAAGGTCCACGCAGTTGTTGGTTTCCT
CGGAGATGATGTTGATCCTCTCGTGACCGTGATGAAACTTGAAAAAGCTCCGAAAGAATC
ATACGCTGATATCGGGGGGCTGGATACACAGATTACTGAAATAAAGGAATCTGTGGAGCT
GCCATTAACCCACCCCGAGTATTACGAAGAAATGGGGATTAAACCTCCTAAAGGTGTGAT
CTTGTATGGACCCCCTGGAACCGGTAAAACATTGCTAGCGAAAGCTGTAGCCAACCAAAC
ATCGGCGACCTTTCTACGTGTGGTTGGGTCAGAGTTGATACAGAAATACCTCGGTGACGG
ACCTAAACTTGTGAGGGAATTATTCCGTGTGGCAGAGGAGCATGCGCCATCCATTGTGTT
TATTGATGAGATTGATGCCATTGGTACTAAGAGATACGAATCTAACTCTGGTGGTGAACG
TGAGATACAGCGTACGATGTTAGAGTTATTGAACCAACTTGATGGTTTTGACTCGAGGGG
CGATGTTAAAGTCATCATGGCGACGAACAGAATTGACTCGCTCGACCCAGCGCTGATCAG
AGCAGGTCGAATTGATCGAAAGATTGAGTTCCCGATGCCGGATGAGAAGACAAAGCGTCG
TATATTCAATATACATACAGCTCGTATGACGCTTTCCGACGATGTTAATGTGGACGAACA
TGTTCAAGCCAAAGATGATTTATCCGGGGCCGATATCAAGGCAATTTGCACCGAGGCGGG
TTTACTTGCATTGAGAGAACGTAGAATGAAAGTCACGAGTGAAGATTTCAAAAAGTCCAA
GGAAAATGTTCTTTACCGAAAGAATGAGGGCGCCCCACAAGGATTATATTTATAAACATT
CATACAATTTGTTGAAGATTAAAAACATTGAGATGTTTCGGTTATTAAGTTGTTCAACTG
GACACAAAGTTGCTGCATTGAAAACAGACGTTTATTAAACGTATAAGGATTAGATTAAAC
ACAGGTCATGTTTCGTTTAAAGTTGAAAACATTACAATGTTATAATTATTCAGAAGTTCA
ACTTTATGAAAATATTGCTGCATTAAAACATTGAATAAACTTCGGATCTGCATATCTTTC
TAGTGGTTACAAAATACATATTTGTTTATAAAAAACATTGAAAAATTACACTTATTTTAT
GGTTGAA
| PANTHER |
26S_subunit_4 (IPR035244) - T[9-451] 3.9E-256 |
| TIGRFAM |
26S_Psome_P45-like (IPR005937) - T[86-437] 7.4E-136 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[191-441] 1.35E-65 |
| SMART |
AAA+_ATPase (IPR003593) - T[229-368] 2.3E-20 |
| Pfam |
ATPase_AAA_core (IPR003959) - T[233-365] 2.9E-43 |
| ProSitePatterns |
ATPase_AAA_CS (IPR003960) - T[336-354] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PRS8_HUMAN | 51.543 % | 347 | 1.92E-116 |
| PRS4_HUMAN | 88.221 % | 754 | 0 |
| PRS6B_HUMAN | 50.135 % | 394 | 7.86E-135 |