- Transcript 'KH2012:KH.C6.132.v5....' >
- Transcript 'KH2012:KH.C1.250.v2....' >
- Transcript 'KH2012:KH.C9.680.v1....' >
- Molecular Tool 'Dlx.b>Bmp2/4' >
- Transcript 'KH2012:KH.L52.2.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.L52.2.v1.A.SL2-1
Possible name(s)
CNTN5; HMCN2; SIGLEC10
Gene model
Location
KhL52 [700 / 5,048]
Amino acid sequence
Length: 514
>KH.L52.2.v1.A.SL2-1
NMNNLVIQTVVAVMSIVKLGSAQSADSCFVGGIRLNSVNDGYVRSTNSSTTFVITSYNTP
TCTKVTWSFISQSPIPVASYDFSTSKAAYNPAYGNGKLVVRATTISSNQADVTFQINQLS
SSENNTKIAASNTATSNVTIQVLIIKDCSSPTPNNVPVNPSSGVYNTQANFQCSHGSTLF
YINGTTGNTATKCLATAEWENEKIVQCWSAPTATLIGNNTICAGNIATFQCTASGGVPSL
DRVEIYFNNQKQMLVGNTWTSNPLSSSNNGDIVECRAINSYTAMQEYTNLGRDSKTLNVH
YSATNPKFETKFTDLLINSSSGYLLRSDETLTMNCSADGNPAVTCNWSCSPTNCGSLPNA
CEINNVKVVGSTTITCTVGNGVCGGSATSVTQHITVVSKTRDPNIVVDGSTTKASSITRN
KTESLSLFCGIQNQQEMNTLIVWKKDGIVRSIGSLYIPSVASSDDGLYVCETSDAFGNFS
TSVSLTVLYPAEQFQITNAIGNQCEWETVGPQLL
Nucleotide sequence
Length: 1,915
>KH2012:KH.L52.2.v1.A.SL2-1
ACTTTAAAATATGAATAATTTAGTTATTCAAACTGTCGTTGCTGTTATGAGTATTGTGAA
ACTTGGTTCTGCTCAAAGTGCTGATAGCTGTTTTGTTGGTGGAATTCGATTAAACAGTGT
CAATGATGGATATGTTCGTTCAACAAACTCAAGCACAACATTTGTAATTACTTCTTATAA
CACACCCACCTGTACAAAGGTAACATGGTCGTTTATCAGCCAATCACCAATTCCAGTTGC
AAGTTATGATTTCTCAACATCAAAAGCAGCATATAATCCAGCTTATGGAAATGGAAAATT
GGTGGTCAGAGCTACTACCATTAGTAGTAATCAAGCAGATGTTACATTTCAAATCAACCA
ACTATCATCTAGTGAGAATAATACAAAGATTGCTGCATCTAATACTGCAACAAGCAATGT
AACAATACAAGTTCTAATAATTAAAGATTGTTCATCTCCAACACCCAACAATGTTCCAGT
CAACCCATCAAGTGGTGTCTACAACACTCAAGCTAACTTCCAGTGTTCCCATGGTTCAAC
TTTATTTTATATAAATGGAACAACTGGAAACACTGCAACCAAATGCCTTGCTACAGCAGA
GTGGGAGAATGAAAAGATAGTTCAATGTTGGTCAGCACCAACTGCTACATTGATTGGCAA
CAATACCATTTGTGCTGGAAACATTGCTACATTCCAATGTACTGCATCTGGGGGTGTCCC
TTCTTTGGACAGAGTTGAAATTTATTTCAATAATCAAAAACAAATGTTGGTTGGAAACAC
ATGGACAAGCAATCCACTGAGTAGTTCAAACAATGGAGATATAGTGGAATGTAGAGCTAT
AAATAGCTACACTGCCATGCAGGAATATACAAACTTGGGAAGAGACAGCAAGACATTAAA
TGTTCACTATTCAGCAACAAATCCAAAATTTGAAACCAAATTCACGGATCTGTTGATCAA
TTCAAGCAGTGGTTACCTGCTTAGATCAGATGAGACGTTGACCATGAATTGCTCAGCTGA
TGGGAACCCTGCTGTAACTTGTAACTGGTCTTGTTCTCCTACAAATTGTGGTAGTTTACC
GAACGCTTGTGAGATCAACAATGTAAAGGTTGTTGGTTCCACAACCATCACATGTACGGT
TGGTAATGGTGTTTGTGGAGGTAGTGCTACTAGTGTTACTCAACACATAACAGTGGTATC
TAAAACTAGAGATCCAAACATAGTGGTTGATGGATCAACAACAAAAGCATCTTCCATCAC
AAGAAACAAAACAGAAAGTTTAAGTTTATTTTGTGGAATTCAAAACCAGCAAGAAATGAA
CACGTTGATAGTTTGGAAAAAAGATGGAATTGTTCGGTCAATTGGATCATTGTACATACC
TAGTGTGGCATCATCAGATGATGGTTTATATGTTTGTGAAACATCTGATGCGTTCGGAAA
CTTTTCTACTTCTGTTAGTTTAACAGTTCTCTATCCTGCAGAACAGTTTCAAATCACTAA
TGCTATAGGTAATCAATGTGAATGGGAAACTGTTGGGCCACAATTATTGTAACATCACAT
TCTCACTGAATCCAGTCACACATTCTGCCATTTTGAAGAAAAATGGGTTGATTGCTGATA
ATGATTTCAAATATAAACCTCAGAGCACGAACATTCAAAACTATGTATTCATGAAGAATC
AGCCAACTCAAAATGACACTGGTTCATACACATTGACAGTGACATCATCAACTTTTACTC
CTGTCATCTTCCCATTCACAGTTCTTGTTTCAAATTCTATTGTAGTTCCTAAAGATACCA
CAGCTACTATTGTTGGGGCAGTTCTTGGTTCAATAATTGCGATTCTTCTGATCATAATCA
CATTTCTTGTTGTTAAACTTTACAGAAACAAGAAACCTAAAACTTCCCACCCAAG
| PANTHER |
Myelin_P0-rel (IPR000920) - T[2-303] 8.9E-68 - T[331-371] 8.9E-68 - T[377-481] 8.9E-68 |
| ProSiteProfiles |
Sushi_SCR_CCP_dom (IPR000436) - T[146-209] 8.085 |
| ProSiteProfiles |
Ig-like_dom (IPR007110) - T[306-395] 6.905 - T[403-486] 11.352 |
| SMART |
Ig_sub (IPR003599) - T[320-397] 22.0 - T[414-488] 5.5E-6 |
| Gene3D |
Ig-like_fold (IPR013783) - T[408-496] 6.1E-8 |
| SUPERFAMILY |
Ig-like_dom_sf (IPR036179) - T[413-491] 1.33E-10 |
| Protein Name | Identity | Bit Score | e-value |
|---|