- Transcript 'KH2012:KH.S1206.2.v2...' >
- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'Mooccu.CG.ELv1_2.S55...' >
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- Transcript 'KH2012:KH.L52.2.v1.R...'
Transcript Model
Transcript Id
KH2012:KH.L52.2.v1.R.ND1-1
Possible name(s)
CNTN5; HMCN2; SIGLEC10
Gene model
Location
KhL52 [701 / 5,048]
Amino acid sequence
Length: 514
>KH.L52.2.v1.R.ND1-1
NMNNLVIQTVVAVMSIVKLGSAQSADSCFVGGIRLNSVNDGYVRSTNSSTTFVITSYNTP
TCTKVTWSFISQSPIPVASYDFSTSKAAYNPAYGNGKLVVRATTISSNQADVTFQINQLS
SSENNTKIAASNTATSNVTIQVLIIKDCSSPTPNNVPVNPSSGVYNTQANFQCSHGSTLF
YINGTTGNTATKCLATAEWENEKIVQCWSAPTATLIGNNTICAGNIATFQCTASGGVPSL
DRVEIYFNNQKQMLVGNTWTSNPLSSSNNGDIVECRAINSYTAMQEYTNLGRDSKTLNVH
YSATNPKFETKFTDLLINSSSGYLLRSDETLTMNCSADGNPAVTCNWSCSPTNCGSLPNA
CEINNVKVVGSTTITCTVGNGVCGGSATSVTQHITVVSKTRDPNIVVDGSTTKASSITRN
KTESLSLFCGIQNQQEMNTLIVWKKDGIVRSIGSLYIPSVASSDDGLYVCETSDAFGNFS
TSVSLTVLYPAEQFQITNAIGNQCEWETVGPQLL
Nucleotide sequence
Length: 1,914
>KH2012:KH.L52.2.v1.R.ND1-1
CTTTAAAATATGAATAATTTAGTTATTCAAACTGTCGTTGCTGTTATGAGTATTGTGAAA
CTTGGTTCTGCTCAAAGTGCTGATAGCTGTTTTGTTGGTGGAATTCGATTAAACAGTGTC
AATGATGGATATGTTCGTTCAACAAACTCAAGCACAACATTTGTAATTACTTCTTATAAC
ACACCCACCTGTACAAAGGTAACATGGTCGTTTATCAGCCAATCACCAATTCCAGTTGCA
AGTTATGATTTCTCAACATCAAAAGCAGCATATAATCCAGCTTATGGAAATGGAAAATTG
GTGGTCAGAGCTACTACCATTAGTAGTAATCAAGCAGATGTTACATTTCAAATCAACCAA
CTATCATCTAGTGAGAATAATACAAAGATTGCTGCATCTAATACTGCAACAAGCAATGTA
ACAATACAAGTTCTAATAATTAAAGATTGTTCATCTCCAACACCCAACAATGTTCCAGTC
AACCCATCAAGTGGTGTCTACAACACTCAAGCTAACTTCCAGTGTTCCCATGGTTCAACT
TTATTTTATATAAATGGAACAACTGGAAACACTGCAACCAAATGCCTTGCTACAGCAGAG
TGGGAGAATGAAAAGATAGTTCAATGTTGGTCAGCACCAACTGCTACATTGATTGGCAAC
AATACCATTTGTGCTGGAAACATTGCTACATTCCAATGTACTGCATCTGGGGGTGTCCCT
TCTTTGGACAGAGTTGAAATTTATTTCAATAATCAAAAACAAATGTTGGTTGGAAACACA
TGGACAAGCAATCCACTGAGTAGTTCAAACAATGGAGATATAGTGGAATGTAGAGCTATA
AATAGCTACACTGCCATGCAGGAATATACAAACTTGGGAAGAGACAGCAAGACATTAAAT
GTTCACTATTCAGCAACAAATCCAAAATTTGAAACCAAATTCACGGATCTGTTGATCAAT
TCAAGCAGTGGTTACCTGCTTAGATCAGATGAGACGTTGACCATGAATTGCTCAGCTGAT
GGGAACCCTGCTGTAACTTGTAACTGGTCTTGTTCTCCTACAAATTGTGGTAGTTTACCG
AACGCTTGTGAGATCAACAATGTAAAGGTTGTTGGTTCCACAACCATCACATGTACGGTT
GGTAATGGTGTTTGTGGAGGTAGTGCTACTAGTGTTACTCAACACATAACAGTGGTATCT
AAAACTAGAGATCCAAACATAGTGGTTGATGGATCAACAACAAAAGCATCTTCCATCACA
AGAAACAAAACAGAAAGTTTAAGTTTATTTTGTGGAATTCAAAACCAGCAAGAAATGAAC
ACGTTGATAGTTTGGAAAAAAGATGGAATTGTTCGGTCAATTGGATCATTGTACATACCT
AGTGTGGCATCATCAGATGATGGTTTATATGTTTGTGAAACATCTGATGCGTTCGGAAAC
TTTTCTACTTCTGTTAGTTTAACAGTTCTCTATCCTGCAGAACAGTTTCAAATCACTAAT
GCTATAGGTAATCAATGTGAATGGGAAACTGTTGGGCCACAATTATTGTAACATCACATT
CTCACTGAATCCAGTCACACATTCTGCCATTTTGAAGAAAAATGGGTTGATTGCTGATAA
TGATTTCAAATATAAACCTCAGAGCACGAACATTCAAAACTATGTATTCATGAAGAATCA
GCCAACTCAAAATGACACTGGTTCATACACATTGACAGTGACATCATCAACTTTTACTCC
TGTCATCTTCCCATTCACAGTTCTTGTTTCAAATTCTATTGTAGTTCCTAAAGATACCAC
AGCTACTATTGTTGGGGCAGTTCTTGGTTCAATAATTGCGATTCTTCTGATCATAATCAC
ATTTCTTGTTGTTAAACTTTACAGAAACAAGAAACCTAAAACTTCCCACCCAAG
| PANTHER |
Myelin_P0-rel (IPR000920) - T[2-303] 8.9E-68 - T[331-371] 8.9E-68 - T[377-481] 8.9E-68 |
| ProSiteProfiles |
Sushi_SCR_CCP_dom (IPR000436) - T[146-209] 8.085 |
| ProSiteProfiles |
Ig-like_dom (IPR007110) - T[306-395] 6.905 - T[403-486] 11.352 |
| SMART |
Ig_sub (IPR003599) - T[320-397] 22.0 - T[414-488] 5.5E-6 |
| Gene3D |
Ig-like_fold (IPR013783) - T[408-496] 6.1E-8 |
| SUPERFAMILY |
Ig-like_dom_sf (IPR036179) - T[413-491] 1.33E-10 |
| Protein Name | Identity | Bit Score | e-value |
|---|