- Transcript 'KH2012:KH.L53.12.v1....'
Transcript Model
Transcript Id
KH2012:KH.L53.12.v1.C.SL1-1
Possible name(s)
ZNF502; ZNF551
Gene model
Location
KhL53 [4,027 / 5,423]
Amino acid sequence
Length: 331
>KH.L53.12.v1.C.SL1-1
LRFTCYTLMSPKKTKKFNKPVANKKWSPVTEVKQEIVEALPFPAEENKDEENTNKLRKTR
SHTRKENGLPKLICSICNKTFQSQKRLANHMKLHDEDDQFSCEISFTDLCVMELTEPETA
ETNEGEGMKAEVEVTVDDAVPIFKPEKIKMFRTIDYRGRPKGKEMKTCPTCGKTFESTAK
TKQHMRRVHAEVKNFQCKDCDKKFCTRSNLCSHMLVHSGERAYQCASCNHAFKTRLALKR
HFLTHTGERPYKCPYCDKTFRLSSTLIRHRDAHVKEKKYSCDICGKNFHQKVNLKQHLLI
HTGEKPFSCKFCSKSFTQGSNLKSHVYKMHS
Nucleotide sequence
Length: 1,396
>KH2012:KH.L53.12.v1.C.SL1-1
GGTTAAGGTTTACCTGTTATACATTAATGTCTCCCAAAAAAACGAAAAAATTCAACAAAC
CGGTTGCAAACAAAAAGTGGAGTCCTGTAACTGAAGTTAAACAAGAAATCGTTGAAGCAC
TTCCTTTTCCTGCTGAAGAGAACAAAGACGAAGAAAATACTAACAAGTTAAGAAAAACAC
GCTCGCACACCCGCAAGGAAAATGGATTACCAAAATTGATTTGCTCCATTTGTAATAAAA
CTTTCCAGTCACAGAAAAGACTGGCAAACCATATGAAACTACATGATGAAGATGACCAAT
TCAGTTGCGAAATTAGTTTCACAGATTTGTGTGTGATGGAATTAACAGAACCGGAAACTG
CAGAAACAAACGAAGGAGAGGGAATGAAAGCTGAAGTAGAAGTTACTGTAGATGACGCTG
TGCCAATATTTAAACCTGAAAAGATCAAAATGTTTAGAACAATTGATTATCGTGGACGTC
CAAAGGGCAAAGAAATGAAAACTTGCCCAACTTGTGGTAAAACATTTGAATCAACGGCCA
AAACAAAGCAACATATGCGACGAGTGCATGCAGAAGTTAAGAATTTTCAATGCAAAGATT
GTGACAAAAAATTTTGTACAAGAAGCAATTTATGTTCACACATGCTCGTACATTCAGGGG
AAAGAGCTTACCAATGCGCTTCTTGCAATCATGCCTTTAAAACGCGTCTAGCATTAAAGC
GCCATTTCCTAACTCACACTGGCGAGAGGCCGTACAAATGTCCATATTGTGATAAAACAT
TTCGACTGTCTTCTACACTAATTCGACACAGAGATGCTCATGTTAAAGAAAAGAAATACA
GCTGCGATATTTGTGGAAAGAATTTTCATCAGAAAGTGAATTTAAAACAACATCTTCTCA
TACACACTGGAGAGAAACCTTTCAGTTGCAAATTTTGCAGCAAATCTTTTACACAAGGAT
CCAATTTGAAATCTCATGTTTATAAAATGCATAGCTAAGAATTTTCTTATGGTCAAAATC
CCATAACTGGTTTCATTCTGTTGTCTGTGTAATTTCAAAAACTACCAATCATATTTAAGT
TAACAAATTTTCAGGCATCATGTTGTTTTTGTTGATACTTTTTTTTCATACAAATTCTGT
GATACAATTAGTATGTAACATTAAATTAAAAATATGTTGTCAATTTATCATCTCTAAATT
AATTCCCTTACCTGGTATACATTGTTGTAAAGTTATTACATGGCATTTATGTTACTATGT
ATTGTTACATGCATGGTTTGATTTATCTTCAGTGAATTGTAATGACGTGTAAAATGTTCG
GTTATTATGTAGTTAGACATATACTTCTACACCATGACATTCTCCATTCAAAAAAATGAA
TATGATGGATCAGAAA
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[60-104] 7.44E-6 - T[162-223] 4.28E-12 - T[231-288] 8.18E-20 - T[273-325] 8.55E-18 |
| SMART |
Znf_C2H2_type (IPR013087) - T[72-94] 3.4E-4 - T[166-189] 0.41 - T[195-217] 0.0024 - T[223-245] 0.025 - T[251-273] 0.0021 - T[279-301] 8.3E-4 - T[307-330] 0.0056 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[72-99] 11.053 - T[166-194] 11.136 - T[195-222] 14.149 - T[223-250] 14.503 - T[251-278] 13.297 - T[279-306] 16.477 - T[307-331] 12.321 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[74-94] . - T[168-189] . - T[197-217] . - T[225-245] . - T[253-273] . - T[281-301] . - T[309-330] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN345_HUMAN | 35.424 % | 151 | 8.61E-42 |
| ZN502_HUMAN | 35.106 % | 161 | 3.25E-45 |
| ZN551_HUMAN | 33.333 % | 155 | 2.35E-42 |