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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S2...'
  2. Clone 'cima8107331'
  3. Clone 'cign049g16'
  4. Transcript 'KH2012:KH.C5.23.v4.A...'
  5. Transcript 'KH2012:KH.L53.16.v1....'

Transcript Model

Transcript Id

KH2012:KH.L53.16.v1.R.ND1-1

Possible name(s)

TMED10; TMED4; TMED9

Location

KhL53 [151,806 / 154,935]

Sequences

Amino acid sequence

Length: 210

>KH.L53.16.v1.R.ND1-1
QYPIVTMNLYILFGTLLLIKGAYSIYFELPMDTEKCLREEIHKDVLVTGDYDVSTQPSVK
VSLKVTDTNGHILYQKDEATQGKFAFTTDDYDMFQICFTSKADFKGKMPPQEVKLLLKRG
VEAKNYDELAKTEKLKPLEVELRRLEDLSESIVQAFAYMKKREEEMRNTNESTNSRVLYF
SMFSMLCLIGLATWQVLYLRKFFKSKKLIE

Nucleotide sequence

Length: 1,126

>KH2012:KH.L53.16.v1.R.ND1-1
AGCAGTACCCAATAGTCACTATGAATTTGTACATACTGTTTGGCACCTTGCTTCTCATAA
AGGGGGCTTATTCAATTTATTTTGAATTGCCAATGGACACCGAGAAATGTTTACGAGAAG
AAATACACAAAGATGTTTTGGTCACTGGTGATTATGACGTCAGCACTCAACCATCGGTTA
AAGTTAGTTTGAAGGTAACAGATACAAACGGTCACATATTGTACCAGAAAGATGAAGCAA
CTCAGGGTAAATTTGCATTCACCACAGATGATTATGACATGTTCCAAATTTGCTTCACCA
GCAAAGCTGATTTCAAAGGTAAAATGCCACCACAAGAAGTTAAATTGCTGCTAAAACGTG
GAGTTGAAGCAAAGAATTATGATGAGCTTGCTAAAACTGAGAAACTGAAGCCACTTGAAG
TTGAATTACGAAGGTTGGAAGATTTATCGGAATCAATCGTGCAAGCGTTCGCTTACATGA
AGAAACGTGAAGAAGAGATGAGAAATACAAATGAATCAACGAACTCCCGAGTTCTTTACT
TCAGCATGTTTTCAATGCTTTGCTTGATTGGATTGGCCACTTGGCAAGTCCTTTACCTCA
GAAAGTTCTTCAAGTCAAAGAAGCTCATTGAATAAATCAATTTCTTCCAATTTTAACCGT
TATTGTGCACGGGAATCTGGTGTTGCACGTACACCAAAGCTTTAACGGTGGTTAGGTATA
CGATTAATGCATTTTCGCTGGAAAAATATTTATTTTGCAGCACTGTAAACAACACTGCTC
CTACAGTTTTTTTTAAATTGCAAAAATACCACTTTTTAAATTGCAAAAAAACACCACCTT
TTAAATTGCAAAAAAACACTAAAATTTTTTGAAAATATCTCAAAATAGTTCTGCCGTACA
AAGCAAATACCGGAATTTTCATTTATTTTTTTCCTGTATATTTATGTTGTTTAATTTTGG
CAAACGGGAATTTAGTTGTGCAGTAATTTTGTTCACTGAACTTTAAATATTTTTGTAGAT
TTGTGTTTTACGTGGTATAGGAAATAATAACAAGAAAAAAGAACAATTTGTTTAAAGGTT
TTTACCAATCATACTTTTCACGTTGAAAGTGTTATGAAATTTTAAA

InterProScan

PANTHER
TMP21-related (IPR015720) - T[9-209] 1.7E-81
SMART
GOLD_dom (IPR009038) - T[24-204] 1.4E-68
Pfam
GOLD_dom (IPR009038) - T[25-204] 1.7E-49
ProSiteProfiles
GOLD_dom (IPR009038) - T[34-144] 15.944

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TMED9_HUMAN 31.163 % 110 4.95E-30
TMED4_HUMAN 30.942 % 111 2.12E-30
TMEDA_HUMAN 70.157 % 279 2.93E-96