Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.L55.3.v1.A.nonSL2-1

Possible name(s)

AC073896.1; CS

Gene model

KH2012:KH.L55.3

Location

KhL55 [6,345 / 7,382]

Sequences

Amino acid sequence

Length: 220

>KH.L55.3.v1.A.nonSL2-1
GYNDPEFIELMRLYLVIHSDHEGGNVSAHTSHLVGSALSDPYLSMAAAMNGLAGPLHGLA
NQEVLVWLTGVYKELGGKEVTDEELRKYIWDTLMSGRVVPGYGHAVLRKTDPRYTCQREF
ALKHLPDDPMFKLVGQLYKLVPDILLEQGKAKNPWPNVDAHSGVLLQYYKMTEMQYYTVL
FGVSRVLGCLSQQIWSRALGLPLERPKSMSTEGLKKFVKK

Nucleotide sequence

Length: 1,037

>KH2012:KH.L55.3.v1.A.nonSL2-1
GGGTACAACGATCCAGAGTTTATCGAGTTGATGAGACTTTACCTTGTGATACATTCCGAC
CACGAGGGGGGAAACGTTAGCGCTCACACATCTCATCTAGTGGGAAGCGCGCTCAGTGAT
CCTTACCTGTCCATGGCTGCTGCTATGAATGGGCTCGCTGGACCTTTGCATGGGTTGGCC
AACCAAGAAGTTCTTGTTTGGTTGACGGGAGTTTACAAGGAGCTTGGCGGGAAAGAAGTT
ACCGATGAAGAATTGCGAAAATACATCTGGGATACTTTGATGAGTGGACGGGTTGTGCCG
GGGTACGGACATGCTGTGCTGAGGAAGACTGACCCACGTTATACTTGCCAGCGTGAGTTT
GCATTGAAACATCTTCCTGACGATCCAATGTTTAAACTGGTCGGCCAACTCTACAAGTTG
GTTCCTGATATTCTGCTTGAACAAGGGAAAGCCAAGAACCCATGGCCCAACGTAGATGCG
CACAGTGGGGTGTTGTTGCAGTATTATAAGATGACCGAGATGCAATACTACACCGTGTTG
TTCGGGGTTTCCCGCGTCCTCGGTTGTCTCTCTCAACAAATATGGAGCCGAGCTCTCGGC
TTGCCGCTGGAACGACCAAAGTCCATGAGCACCGAAGGATTGAAAAAATTCGTCAAGAAA
TAAATTGTTTAAAAATAAGTTTATAATTTATTAGAAGTTTGTGTTAAATATGTTGCTATA
TTGATTAACCAATGTAAAGTTCGATTGTGCGTTAGCGAGAATAAATATTTGTTCAAGTCC
ATGGTTTGCTGCCTCTTATGTGCCGCATCGACGTCAATGATCTGAAAATAAAATTCAAAA
AATAAAAGTAAAATTAAACAATGGATTGCAACATACTTTGAACCAGCTATGTTAGGAACG
TTTGGTTTCTTTTTAACATTTTGTTGATTCGTTATCTTCCCCTTCCCTCCCTTATCGACT
ACTTTTCCTTTAAAAGCTCGCGTTAAATCAACTTTGACCGTCGGCATTTCTGTTAAAGTC
ATCGTTAATTAAATACT

InterProScan

Gene3D	Citrate_synth-like_lrg_a-sub (IPR016142) - T[1-59] 2.3E-108 - T[176-207] 2.3E-108
PANTHER	Citrate_synthase (IPR002020) - T[3-219] 5.0E-109
SUPERFAMILY	Citrate_synthase_sf (IPR036969) - T[3-213] 1.18E-80
Pfam	Citrate_synthase (IPR002020) - T[4-207] 3.4E-65
PRINTS	Citrate_synthase (IPR002020) - T[10-25] 1.1E-44 - T[33-61] 1.1E-44 - T[94-114] 1.1E-44 - T[155-171] 1.1E-44 - T[176-190] 1.1E-44
Gene3D	Citrate_synth-like_sm_a-sub (IPR016143) - T[60-175] 2.3E-108
ProSitePatterns	Citrate_synthase_AS (IPR019810) - T[101-113] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
CISY_HUMAN	85.78 %	390	2.46E-136