- Clone 'ciad052j18' >
- Transcript 'KH2012:KH.C2.158.v1....' >
- Transcript 'KH2012:KH.S425.11.v1...' >
- Transcript 'KH2012:KH.C2.118.v3....' >
- Transcript 'KH2012:KH.L59.1.v1.B...'
Transcript Model
Transcript Id
KH2012:KH.L59.1.v1.B.nonSL1-1
Possible name(s)
ZIC2; ZIC3; ZIC4
Gene model
Location
KhL59 [343 / 1,751]
Amino acid sequence
Length: 353
>KH.L59.1.v1.B.nonSL1-1
SLRQSAYQRTSPSYNMYSNVMVNRPYAAYDPRESLTAHASFLQGHQQPIDSKSYSMANHP
SASYYPGYGMIPHFAQSLESHLQGMHNSNSRENFIQCKYPTHSTLTNPIACQKRKGFKAK
YKLVNHIRVHTGEKPFICPFPDCGKTFGRSENLKIHQRTHTGERPFPCKFPGCERRFANS
SDRKKHSYMHNTEKLYACKYEGCDRSYTHPSSLRKHIRMHESNGDVIDNGSNHSPTSSCG
SVEDVAREQNSVENNSVSTYLPPRFTSSPIHAPLATYDASEKQKFSRVEKQAKFTEDFMN
HGQDVTSSPPQLNLNTALTEDCYNNYYIPQISNETYKSSFSPVSFQLPTHFVA
Nucleotide sequence
Length: 1,124
>KH2012:KH.L59.1.v1.B.nonSL1-1
AGTTTACGGCAGTCAGCATACCAGAGAACATCTCCATCTTACAATATGTATTCTAATGTA
ATGGTTAATCGTCCCTATGCAGCATATGATCCAAGAGAAAGTCTAACAGCTCACGCATCG
TTTCTTCAAGGACACCAACAACCCATTGATTCCAAGTCTTACTCGATGGCTAATCATCCA
AGTGCGTCATATTACCCAGGATATGGGATGATTCCTCATTTTGCTCAATCCTTGGAGTCT
CACCTTCAAGGAATGCACAATTCCAACAGTAGAGAGAATTTCATCCAGTGCAAATATCCG
ACGCATTCGACTCTCACGAATCCGATTGCTTGCCAAAAACGCAAAGGTTTCAAAGCAAAG
TACAAATTGGTGAATCATATTCGAGTTCATACTGGGGAGAAACCATTTATTTGCCCCTTT
CCTGATTGTGGTAAAACGTTTGGAAGAAGCGAGAATTTAAAGATCCATCAAAGAACGCAC
ACAGGTGAACGACCCTTTCCTTGTAAATTTCCCGGATGTGAAAGACGGTTTGCAAACAGT
TCCGATCGTAAGAAGCATAGTTACATGCACAACACTGAAAAACTTTATGCGTGTAAGTAC
GAAGGTTGCGACCGAAGCTACACTCATCCAAGTTCACTACGTAAGCACATACGTATGCAT
GAATCCAATGGTGACGTAATCGACAACGGATCCAATCATTCTCCCACGAGCTCGTGTGGT
TCAGTAGAAGATGTAGCTCGAGAACAAAACTCCGTTGAAAATAATTCCGTTTCAACATAT
TTACCTCCACGATTTACGTCATCGCCGATTCATGCACCTTTAGCCACTTATGATGCTTCA
GAAAAACAAAAATTTTCCCGTGTTGAGAAGCAAGCTAAATTCACAGAAGATTTTATGAAC
CACGGACAAGATGTGACATCATCTCCACCTCAATTAAACTTGAACACAGCTTTAACCGAA
GATTGTTACAACAATTACTATATACCTCAAATATCTAATGAAACTTATAAATCTTCCTTT
TCTCCTGTCTCGTTTCAATTACCCACGCATTTTGTTGCGTAAAATGTTTACTCGTTTTTT
ATTTGCGGTACTTTATAACAAAATACAATATATCTATGAAACAA
| SMART |
Znf_C2H2_type (IPR013087) - T[109-130] 56.0 - T[136-160] 1.3E-4 - T[166-190] 0.044 - T[196-220] 1.8E-4 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[115-135] 9.203 - T[136-165] 16.955 - T[166-195] 10.408 - T[196-225] 11.24 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[117-173] 4.1E-20 - T[177-221] 5.54E-10 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[138-160] . - T[168-190] . - T[198-220] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZIC4_HUMAN | 67.424 % | 185 | 5.17E-56 |
| ZIC2_HUMAN | 68.217 % | 183 | 2.18E-53 |
| ZIC3_HUMAN | 68.217 % | 185 | 1.47E-54 |