- Transcript 'KH2012:KH.L61.13.v1....'
Transcript Model
Transcript Id
KH2012:KH.L61.13.v1.A.SL1-1
Possible name(s)
VPS28
Gene model
Location
KhL61 [14,198 / 15,800]
Amino acid sequence
Length: 214
>KH.L61.13.v1.A.SL1-1
LEIKLNMSTVRPELYQEVKLYSNAREREKYDNLAELYSIIKTLQALEKAYIKDSITAKDY
TGACSKMLEQYKVAFRQVKTEVSTLDEFVKRYKLEDCHAALERIREDRPITIPDDGGNTS
KCVADIVSLFITVMDKLRLDIRAMDELHPDLKDLSESMSRMTTLPMNFEGRTKVQAWLTT
FAGMAASDDLTDPQARQMLFDMDSAYNAFNRFLA
Nucleotide sequence
Length: 1,040
>KH2012:KH.L61.13.v1.A.SL1-1
ATAATATAGTTAGAAATAAAACTAAATATGTCAACTGTACGACCAGAACTCTACCAGGAA
GTAAAGTTATACAGCAATGCTCGAGAAAGAGAAAAGTATGACAACTTGGCTGAACTTTAT
TCAATTATAAAAACTTTACAAGCTTTGGAAAAAGCATACATCAAAGATTCTATTACAGCA
AAAGACTACACAGGAGCCTGTTCCAAAATGCTTGAGCAATACAAAGTCGCTTTCCGCCAG
GTGAAAACTGAAGTCTCAACGCTGGATGAGTTTGTGAAGAGATACAAACTTGAGGATTGT
CATGCAGCATTGGAAAGGATAAGGGAGGATCGACCAATTACCATCCCTGATGATGGAGGC
AACACAAGCAAATGTGTTGCTGATATTGTTTCGTTGTTCATCACAGTCATGGATAAGTTG
CGACTTGACATCCGTGCAATGGATGAACTACATCCTGATCTTAAAGATTTATCAGAGAGT
ATGAGTAGGATGACGACTCTTCCAATGAATTTTGAAGGAAGAACGAAAGTTCAAGCATGG
CTTACCACATTTGCGGGAATGGCAGCATCAGATGATCTCACAGATCCACAAGCCCGACAA
ATGCTGTTTGACATGGACTCTGCATACAATGCTTTCAACAGATTCCTTGCATGACCTTAT
TAACTATTAATTTTATATTACTTCTTACCATCACTATTTCTTGATATATATGTGATATTT
GTATTGTACAAAGTTCGCTTTATTCACTTTATATTAACATAAAACAATAGATTTTTGATT
TCATTATTCGTGCAATAAATGTCACGTATATACATGGTGTTCATGCGCGCTGATTTTATA
AAAATATGGGATATTGTGGAGTGGGCGTTAACTATAACGTCATATACATAATTAAAAACG
TGCAGCGCATACTTTTTTCGGTAGGAATCAGCAACACAAACTTGGCACTGCCTTTCTTAC
AGTTGCGTTTAAAATAAATGTAATTTACCTGTTAAACTGTGCAACAGTCGGTAATAATCA
GCCGAAGTATTTTCCAGAAA
| Gene3D |
VPS28_N_sf (IPR038358) - T[1-107] 4.1E-34 |
| PIRSF |
Vps28 (IPR007143) - T[4-214] 3.1E-76 |
| ProSiteProfiles |
VPS28_N (IPR017898) - T[7-114] 28.893 |
| PANTHER |
Vps28 (IPR007143) - T[9-213] 7.2E-82 |
| SUPERFAMILY |
ESCRT_assembly_dom (IPR037202) - T[10-106] 1.34E-31 |
| Pfam |
Vps28 (IPR007143) - T[33-213] 1.5E-66 |
| Gene3D |
VPS28_C_sf (IPR037206) - T[114-214] 1.4E-38 |
| ProSiteProfiles |
VPS28_C (IPR017899) - T[118-214] 38.974 |
| SUPERFAMILY |
VPS28_C_sf (IPR037206) - T[119-213] 4.71E-33 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| VPS28_HUMAN | 66.176 % | 297 | 1.83E-103 |