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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C2.64.v1.A...'
  2. Transcript 'Phfumi.CG.MTP2014.S7...'
  3. EST 'AHC0AAA225YJ24_RM1'
  4. Transcript 'Harore.CG.MTP2014.S6...'
  5. Transcript 'KH2012:KH.L63.1.v1.B...'

Transcript Model

Transcript Id

KH2012:KH.L63.1.v1.B.SL1-1

Possible name(s)

BOC; CDON; TTN

Location

KhL63 [78,077 / 89,633]

Sequences

Amino acid sequence

Length: 439

>KH.L63.1.v1.B.SL1-1
PIFPLLPSVMWYPRYNGGSPITEYIIEIKKVRAGGWKKLDEFISADSTTFMITGLKRGAA
YKFRVTSVNTYGRSRPSSSTDPHYTDFGNQSPKILMSAPEITSVVSTNWSNVQINWSYDE
AMSKKLNGYLILYWPSDRRKRKHKKKRLKNALATSYELTSLQSGVLYNVKIQAYNSRGKS
PVSNLVVFEMPNNHSSPLVVMQGIRNVDNDEVSDPGHAKNHYGDDSSDNDNKSNNIVVKQ
QISRRDTAFMIAGGALVFVIIALAASGIIYRRSMTNIKKFLGRKPSNDKITASNGATPND
EYSGLNEGNPPYCECKEVSEHGYEHHHVHSDHILYCDHQECFASAPLWWVRGEERGEFCH
IVPANAKRQPPPNPAGGAEATPQTAMVTRTYAGNIAGGYLSHPSQGETTEIIESVETSLI
DSVQAPLATEEPPNLTLDQ

Nucleotide sequence

Length: 2,645

>KH2012:KH.L63.1.v1.B.SL1-1
GTAGCGGTACTACGTCTAACGTGTGAATAAAATGTAATTTTGAAATGTAAATTCTGTAAT
TTTCTTTCCAAGTCGAAACGACAAGCTCAATGCTTTGGGTTTTCGTGGCAGTGTTGCTTA
GCGGTGTTGCAGCTATCAAAAACAGTTCAGATGTCGGTCGAGCTGGAACAGAAGGAAGCT
TAAATGAAGGACCACAAGATTTTTTTGAAACTTCAAGTTATGTCTTGCTTGCCCCGTCTC
CACCGATCATAACAAGTTCCTCTCGAACATCGGAACCAACCTCGTACTTGCTGTCATGGA
AACCAAACCAAGATGAACATTTTACATCTTATAAAATACGATATATAAAAGACCAACATC
TTAAAAACACCACCCTTAGTAAAAATGATGTTTCTATGTTATGGTACTACATCTCCGTCT
CATCCAATTTAACGTCACGTTTATTAAACAACCTTGAACCATCAAGTTTGTACCAAGTTG
AGATGGTTGGGATAACGAACAACGCTACAAGCCAATTAGCGGTGTCATCATTTAGAACGG
GATCTGGTAGGATATGATATGTTTTCANNNAATTCCAATGTGGGGGTAAATAATCCAAAG
CAAAACCAATACTTAGGAAATCCTCCCGAATCTCCTTCCACACCCACGGTGACCGATCTT
TCCCCTACTTCCGTCAGTCATGTGGTACCCTAGGTATAACGGGGGTTCACCTATCACAGA
ATATATAATTGAGATAAAAAAAGTGCGAGCAGGAGGATGGAAGAAACTTGATGAGTTTAT
ATCAGCTGATTCTACAACCTTTATGATTACTGGGTTGAAACGAGGTGCTGCTTATAAGTT
CCGGGTTACTTCAGTGAACACATATGGCAGATCTCGTCCATCGTCAAGCACTGACCCGCA
TTACACAGACTTTGGAAACCAGAGCCCAAAAATACTTATGTCTGCACCAGAAATCACAAG
TGTGGTTTCCACCAATTGGAGCAATGTTCAAATTAATTGGAGTTATGATGAAGCCATGAG
CAAGAAATTAAACGGATATCTCATACTATATTGGCCATCTGATCGTCGCAAGAGAAAACA
CAAGAAAAAAAGATTAAAAAATGCATTAGCGACGTCATATGAACTGACTTCACTTCAGTC
TGGTGTTTTGTACAATGTTAAAATCCAGGCATACAATTCTCGTGGAAAATCCCCAGTTTC
GAACCTTGTTGTATTTGAAATGCCGAACAATCACTCAAGCCCTCTAGTGGTGATGCAGGG
AATTAGAAACGTCGATAATGATGAAGTTTCCGACCCTGGTCACGCGAAAAATCATTATGG
TGATGATAGTTCAGATAACGACAACAAGAGTAATAATATAGTGGTAAAGCAGCAAATATC
GCGCCGTGATACGGCATTCATGATCGCTGGTGGGGCTCTTGTGTTCGTGATAATTGCTCT
TGCAGCATCAGGTATAATATACAGAAGGAGCATGACCAATATTAAGAAGTTTTTGGGCAG
AAAACCAAGTAATGATAAAATAACAGCCAGCAATGGTGCCACACCCAACGACGAGTATTC
TGGTTTGAACGAGGGAAATCCCCCGTACTGTGAATGCAAGGAAGTAAGCGAACATGGATA
CGAACATCATCATGTTCATAGCGATCATATACTGTATTGCGACCACCAGGAGTGCTTTGC
GAGCGCGCCCTTATGGTGGGTAAGGGGCGAGGAAAGGGGGGAGTTCTGCCATATCGTGCC
AGCTAATGCCAAGCGGCAACCGCCGCCAAATCCTGCCGGTGGTGCCGAAGCCACACCACA
GACTGCAATGGTCACAAGGACCTATGCTGGCAATATTGCAGGTGGATACCTCAGCCACCC
CAGTCAGGGTGAAACTACCGAAATTATTGAATCGGTTGAAACTTCGTTGATCGACTCTGT
ACAGGCCCCACTTGCCACTGAAGAACCCCCTAATTTAACCCTAGATCAGTAAAGTTACAC
CTCCAAAGTTGCAATTTTAAAATAGACCAAACATCCTGATCATATACAACAAACTACTTT
TTGTACAAAGTTTTTTTTTTATTTCATCATTTTTCACTTATATGCATTGTTACCACCAAC
CATACACACTTGCAGTAATAATGCATGCAGTATAAATACATTCTTAATCTCCCTCCCACT
ATTTACTGAACGTTGTACGCTAACCTCAACGTAAGTATTGTTTTTTTAGAACAGTGTGCT
GTCTTCATAAATTTGATCATGTTTTTATTTTTGCCAAATCAAATTTTTTAGTACAAGTGC
TTTACTTTTTTACCCGTTTTACTGCTCCCTTCTTTATTGTAGTATTTACACAAATAATTG
GTACCACACTTTCCTATCAACTTATTGTTGCAATTGAACAGAATGTTTGTACATTGTCGT
ATTGCCTGCCATTCCTCCGTTTTGCGCCCAGTATTATCTTTCCGTATGGTGTCGCAAGGG
AGCACTTTTTCACGTTGAACCAGTTACTAACAACATGATTTAAATAAATTCTGTTCTTAT
AATTGTCTGGTAACCTCGGTCAAGAAAAAAAATGAGTTTAGTTTTTTTGTCAACGTTACT
TAAAATACTGTGTATGAACGTTATTTAGAAGCTATATTTGCCGATTACAAGTCATGGTAC
ATTTA

InterProScan

SMART
FN3_dom (IPR003961) - T[1-74] 7.5 - T[96-180] 2.3E-4
ProSiteProfiles
FN3_dom (IPR003961) - T[1-88] 15.937 - T[98-193] 17.586
Gene3D
Ig-like_fold (IPR013783) - T[8-83] 1.0E-17 - T[84-196] 1.5E-15
CDD
FN3_dom (IPR003961) - T[8-80] 1.34447E-13 - T[97-188] 7.48115E-11
Pfam
FN3_dom (IPR003961) - T[9-77] 1.2E-10 - T[97-182] 1.0E-11
SUPERFAMILY
FN3_sf (IPR036116) - T[9-191] 3.92E-27

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CDON_HUMAN 24.731 % 96.3 3.68E-21
BOC_HUMAN 30.208 % 97.4 1.79E-21