- Transcript 'KH2012:KH.L65.3.v2.R...'
Transcript Model
Transcript Id
KH2012:KH.L65.3.v2.R.ND1-1
Possible name(s)
CLASP1; CLASP2; TOGARAM1
Gene model
Location
KhL65 [23,782 / 67,815]
Amino acid sequence
Length: 1,465
>KH.L65.3.v2.R.ND1-1
DMKKRMNGGQQFIEFLSLNSGDLLWTNVDKIVDALATYWVSSSNFKVALLGLDILSLLVE
RLQDDFQQYYHLIQIALTDRMGDQKDQVRDASITLLTNIMDVASSPQYVFERFSSAFTHK
VWRVREGVCRLLVATINRFGARSLYLSKLLPHVCVLLGDPNAQVREAAVFTLVEIYRHVG
EKVRQDIAKKNLPNSRLSVLYKKFDEVLQSGNMVTASDTGSVASSTGSYDSVESSSSIGL
MRPPMTSVVANNNNSRAVTNKMSSVTVKDGAVDEETFVRDFTSNLPTIHLYGSRDLDDQM
NRIQAVISDEKKDWEERSKSLKALRAVALAGGTEYDAFYQHLRVMEPSLQFNAKDLRSQV
VRETCVTVGCLSSILKNQFEHTACVLMPTLFNLIKNSAKVMSTSGVLTIKTILKHTHGPR
LIPMLMINCTSKTTSLRRFSFVFLDIVLQKWASQLLERHLAILKEAVQKGINDADSETRE
EARKAWWALQGTFPNEADQVFNSLNPSQQKLIKGHLATSSSSTDSQPKLDTRKPRSSVTS
AGPRRSIVTSQVGRAPPTSVGRALGTPNGRFMRSRSDIDPSSANRSKMKAMRSGYGTLVF
YLSRIFKIISVIVLDTGPQRVAKTSTSTISSLAPQRGRETDRSSVSQIANRARSPGAQQP
RTFGARTPSGPARVSKPRPSYTSRDHSPNDYDSVFSEGLAQTRTPPSSPTPTRKSRIPVS
SRSNSRAGSRVGSRVGSRVGSSEPVSRHRSRVSSSQVSSRDSSPGRTPSAVAQSPMMRVL
PKGREGEIALNDALSRKTGRKTDGYGLSDNDDDFSDTSSVCSDRSSSYSRNGLKRHTNHT
EDITEILQLCQSGLWTERKEGLFSLHTLITRHRVFNRLQIKKIIEIFNRMFADPHGKVFS
MFLEMLPDFIQGYKEMLHDWLYFLLTQLLKKMGSDLLGSVQTKVLKALQVTRESFPPLMQ
FNILSRFIVDQTQRPNLKIKIALLHHMLDVTGMLKGIEISNTSDNRLAISRIITWTTEPK
SQDVRKIAEALVISIFELNAPVFTMMIRVLPKTFQDGAMKVLHGYMKTNGDVNSVSSDLS
GQVMGRAAMSPGRTVVSPRGSVGTIDLMSPRSSVHIDTENMNQEEIAENFRDITAGIQKL
RMDSSADVNDAIKNSGQSPGLGASPNFSRPNFPPPLQQLQNSPKLPPGRQSKYNPHVYSD
QLSPFNRGDVKESIFDDDDSFNEEIPTEMSDNISDVAQLLREGGDKRHALEELSRTLRSS
DAVVGLLASQQQIQWDLHFNNVLSGVLEILRTDTDTRVAALNVLREMLRHLAHRFKNFTE
ITVIHIIESHKDGTKQVVRAAEEAANALCCAVPPILCVKVLSPLTRSNNNESTQACLKIL
TNAINRCSEDELDKPLVADLVPGLIKCYDNPESGVRKAAVFCLVALHRVIGDEELCQHLK
SLPGGKMKLLQLYIKRSQSNAATEA
Nucleotide sequence
Length: 4,816
>KH2012:KH.L65.3.v2.R.ND1-1
GACATGAAGAAGCGAATGAACGGTGGCCAACAATTTATTGAATTCTTAAGTTTGAACAGC
GGAGACCTCTTGTGGACAAATGTGGATAAAATCGTGGACGCTTTGGCAACTTATTGGGTC
AGTTCAAGCAATTTCAAGGTTGCACTTTTGGGTTTGGATATTCTAAGTTTACTGGTAGAA
AGGTTACAAGATGATTTCCAGCAATACTACCATCTCATTCAAATAGCATTGACTGACCGT
ATGGGGGATCAGAAGGATCAAGTCCGAGATGCGAGCATCACTCTTCTTACCAACATTATG
GATGTAGCTTCATCTCCTCAGTATGTATTCGAACGATTCTCATCTGCGTTTACCCACAAA
GTATGGAGGGTACGCGAGGGTGTATGTCGCCTCCTTGTGGCCACGATCAACCGATTCGGA
GCTCGCTCGTTATACCTAAGCAAACTTCTTCCACATGTGTGTGTGCTTCTTGGTGATCCA
AATGCACAGGTTAGAGAAGCAGCAGTTTTTACATTGGTGGAGATTTATCGTCACGTTGGT
GAAAAAGTGAGACAAGATATTGCGAAGAAGAATTTACCAAATTCAAGACTCAGTGTTTTA
TACAAGAAATTTGATGAAGTACTTCAATCAGGAAACATGGTAACAGCATCTGATACAGGT
TCTGTAGCAAGTTCCACAGGAAGTTACGATTCAGTTGAATCATCTTCATCCATCGGGCTC
ATGCGACCTCCCATGACCTCTGTGGTTGCCAATAACAACAACAGTCGAGCTGTCACCAAC
AAAATGTCATCAGTGACCGTGAAGGACGGAGCTGTAGATGAGGAGACATTCGTCCGTGAT
TTTACCTCCAACCTCCCCACCATCCATTTATACGGATCCCGGGATCTCGATGATCAGATG
AACCGCATCCAAGCAGTAATCTCCGATGAGAAGAAGGATTGGGAGGAAAGATCTAAATCG
TTAAAAGCCCTGCGTGCAGTTGCGTTGGCAGGAGGTACAGAATACGATGCGTTCTACCAA
CACTTGCGTGTCATGGAACCTTCGTTACAGTTTAACGCAAAAGATTTACGATCGCAAGTT
GTGCGGGAGACCTGTGTTACTGTGGGGTGTTTATCATCAATACTGAAGAACCAGTTCGAA
CACACCGCGTGCGTATTGATGCCAACTTTGTTTAATCTTATCAAAAACTCAGCAAAAGTC
ATGTCCACATCTGGTGTATTAACCATCAAAACTATTTTAAAGCACACCCATGGCCCACGT
CTCATCCCGATGCTCATGATCAACTGCACCTCGAAAACAACCTCCCTACGAAGATTCTCC
TTTGTTTTCCTTGACATTGTTCTACAAAAATGGGCCTCACAGCTATTAGAAAGGCATCTT
GCCATACTAAAAGAAGCCGTACAGAAAGGGATAAACGATGCCGATTCAGAAACAAGGGAA
GAAGCGAGAAAAGCGTGGTGGGCGTTGCAAGGAACTTTCCCCAACGAGGCAGATCAAGTG
TTCAACAGCCTCAACCCAAGTCAGCAGAAGTTAATTAAAGGTCACCTGGCTACTTCTTCA
TCGTCAACTGACAGCCAACCTAAGTTAGACACCAGGAAACCTCGTTCAAGCGTTACATCC
GCCGGACCACGACGTAGCATTGTGACATCACAAGTAGGAAGAGCACCACCAACTTCAGTT
GGGCGAGCACTAGGGACACCTAATGGCCGTTTCATGCGATCACGATCCGACATTGACCCG
TCATCTGCCAACCGGTCAAAGATGAAAGCGATGCGATCTGGTTATGGAACGTTAGTCTTC
TATTTAAGCAGAATCTTTAAAATAATATCCGTCATTGTTTTGGATACAGGGCCACAAAGA
GTAGCGAAGACAAGCACTTCAACAATATCTTCACTTGCACCACAGCGTGGTAGAGAGACA
GATAGATCATCCGTGTCACAAATAGCGAATCGAGCCCGCTCCCCTGGTGCACAACAACCG
CGCACGTTTGGTGCACGAACACCTTCAGGCCCAGCAAGAGTGAGTAAGCCGAGACCATCG
TACACGAGTCGCGACCATAGTCCTAATGACTATGATTCGGTATTCTCTGAGGGTCTCGCA
CAAACCCGTACCCCCCCTTCCTCCCCCACCCCGACCAGGAAGTCTCGGATCCCCGTTTCT
TCCCGCAGCAACTCTAGAGCGGGGTCACGAGTGGGTTCGCGGGTTGGGTCACGGGTAGGG
TCAAGTGAACCGGTATCTCGACACAGAAGTCGTGTCTCATCTTCACAAGTCAGCAGTCGT
GATTCAAGTCCAGGTCGTACCCCATCTGCAGTTGCACAATCTCCCATGATGAGAGTGTTA
CCCAAAGGACGAGAGGGAGAGATCGCGTTGAACGATGCTTTGTCACGCAAGACAGGCCGT
AAAACCGACGGTTACGGTCTGTCGGATAACGACGACGACTTCTCCGATACTTCGAGCGTT
TGTTCCGATCGTTCGTCTTCGTATTCAAGAAATGGTTTAAAACGTCACACCAACCACACT
GAAGATATCACCGAGATATTACAATTGTGTCAAAGTGGTTTATGGACGGAGAGAAAGGAG
GGCTTGTTTAGTCTTCATACGCTTATTACAAGACACAGGGTGTTCAATCGCTTACAAATC
AAGAAAATAATTGAAATATTTAATCGGATGTTTGCTGATCCTCATGGAAAGGTGTTCAGC
ATGTTCCTTGAAATGCTGCCTGACTTTATCCAAGGTTACAAAGAGATGTTGCACGACTGG
TTATACTTCCTACTCACCCAACTGCTCAAGAAAATGGGGTCGGACTTGCTTGGTTCGGTT
CAAACTAAAGTTTTAAAAGCATTACAAGTCACAAGAGAATCTTTTCCCCCTCTCATGCAG
TTTAATATATTGTCACGTTTTATTGTGGATCAAACACAAAGGCCCAACTTAAAGATCAAG
ATAGCATTACTTCACCACATGCTTGATGTTACTGGTATGTTGAAAGGAATCGAAATATCA
AACACAAGTGACAATAGATTGGCGATATCACGTATTATAACTTGGACCACTGAACCAAAG
AGCCAGGATGTCAGAAAGATAGCAGAAGCATTAGTGATTTCCATCTTCGAGCTGAACGCT
CCCGTTTTCACCATGATGATACGAGTTCTCCCGAAAACTTTCCAAGACGGTGCAATGAAG
GTTTTGCATGGATATATGAAGACTAACGGAGATGTCAATTCCGTATCTTCTGATTTATCC
GGTCAAGTTATGGGTCGTGCTGCCATGTCACCTGGAAGGACTGTGGTGTCACCTCGTGGG
AGCGTGGGGACCATTGACCTTATGTCACCGAGATCCAGCGTCCACATCGATACAGAGAAT
ATGAACCAGGAGGAAATTGCTGAAAACTTCCGTGATATTACGGCTGGTATACAGAAGTTG
AGAATGGACAGTAGTGCAGATGTTAATGATGCTATCAAGAACTCTGGACAAAGTCCTGGT
TTAGGGGCTTCCCCAAATTTCAGTCGTCCTAATTTCCCTCCACCCCTGCAACAACTACAG
AACTCACCAAAGTTACCACCGGGTCGGCAAAGCAAATACAACCCCCACGTATATTCGGAC
CAATTATCCCCGTTCAATAGAGGAGATGTGAAGGAATCAATATTTGATGATGATGATAGT
TTTAACGAAGAAATCCCGACCGAAATGTCAGACAACATTTCCGACGTTGCGCAATTGCTT
CGTGAAGGCGGTGACAAGCGTCATGCGCTTGAAGAACTCTCTCGTACATTACGCAGTAGT
GACGCAGTGGTGGGACTCTTAGCATCACAGCAACAAATACAATGGGATCTTCACTTCAAC
AATGTCTTGTCTGGTGTGTTGGAGATATTGAGAACAGATACTGATACAAGAGTAGCCGCA
TTGAATGTTCTTCGCGAAATGTTGCGACACCTTGCCCATAGATTCAAGAACTTTACCGAG
ATAACCGTGATCCATATTATTGAATCGCATAAAGACGGAACTAAACAGGTGGTTCGTGCT
GCAGAAGAAGCAGCGAACGCGTTATGTTGTGCTGTACCCCCTATACTATGTGTTAAAGTT
CTCAGCCCATTAACAAGGTCAAACAATAACGAATCAACGCAAGCATGTTTGAAGATATTG
ACGAACGCCATCAACAGATGTTCAGAGGATGAACTGGATAAACCACTTGTCGCTGATCTG
GTGCCTGGTCTGATTAAGTGTTATGATAATCCTGAGAGTGGGGTGCGTAAAGCTGCTGTA
TTTTGTCTTGTTGCCCTACATCGAGTAATTGGTGATGAAGAACTTTGTCAACACCTAAAG
TCCTTGCCTGGTGGAAAGATGAAACTTCTCCAACTTTACATCAAACGTTCGCAGTCGAAC
GCTGCAACAGAAGCTTAAAGTTGCTGCTTATTTCGACAAGACACCCGTATTTAAAGACAT
CCTGTATGAAGGAAAGACACAAGAATTCAAAAACAAAAATATTTCCCTATGCGTGTCAGA
CATTAGAATTCTGTTAGCAAAATATTTTCTTCACCCTGATATATAAATTAACTTGTGCTG
CGACCTTCTTACCACATTCACCCTGCTGCACTGTGCTTCTGGTCACCTTTATCTGTCTGC
GACAATTCCTTTGTAGCAAAGCCGTTTCTCCTTAAATTTATCAGACTATATTTAAGCGCG
TATACAAATTTGTTTTGCAATTTTTAATGGGAAAACTTATAGGCTTTTTTTGCAATTTTA
AATGGGAAAATTTAATAAGCTTTTTCCCAAAACTTTTTTGCAATTTTAAATGGCAAAGCG
TTAATAGCTTTTCCTG
| SMART |
TOG (IPR034085) - T[1-213] 2.6E-37 - T[289-525] 2.7E-19 - T[1209-1463] 3.1E-22 |
| Gene3D |
ARM-like (IPR011989) - T[1-212] 4.5E-64 - T[271-526] 1.4E-72 - T[838-1068] 5.8E-72 - T[1215-1463] 9.1E-28 |
| SUPERFAMILY |
ARM-type_fold (IPR016024) - T[1-181] 5.49E-37 - T[294-510] 5.49E-37 - T[419-522] 8.96E-35 - T[597-654] 8.96E-35 - T[811-1063] 8.96E-35 - T[1216-1261] 8.96E-35 - T[1294-1448] 8.96E-35 |
| Pfam |
CLASP_N_dom (IPR024395) - T[52-189] 5.9E-10 - T[296-512] 2.6E-33 |
| PANTHER |
CLASP_1 (IPR028399) - T[58-1461] 0.0 |
| ProSiteProfiles |
HEAT_type_2 (IPR021133) - T[149-186] 10.04 - T[1400-1438] 9.449 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CLAP1_HUMAN | 41.736 % | 1066 | 0 |
| CLAP2_HUMAN | 42.446 % | 853 | 0 |