- Transcript 'Harore.CG.MTP2014.S8...' >
- Transcript 'Harore.CG.MTP2014.S9...' >
- Transcript 'Cisavi.CG.ENS81.R16....' >
- Transcript 'KH2012:KH.C3.99.v1.A...' >
- Transcript 'KH2012:KH.L65.9.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.L65.9.v1.A.SL1-1
Possible name(s)
FUCA1; FUCA2
Gene model
Location
KhL65 [170,452 / 174,260]
Amino acid sequence
Length: 407
>KH.L65.9.v1.A.SL1-1
SMLKYTSIAFFFAYVAFAAAFEETSLREILVEENVVEFTKEEIPLVNDEKQNTKRYEPTW
KSIDSRPLPSWFDEAKFGIFIHWGVFSVPSFGNEWFWWNWKGTKNAAIVNFMKRNYPPDF
TYPDFAKEFTAELFQPNEWADLFKDSGAQYIVLTSKHHEGYTNWPSNVSWNWNSMDVGPH
RDLVGDLASSIRNRTNLKFGVYHSLFEWFHPLYIQDKAGHFKSQSFVARKSMPELYELVN
KYKPDIVWSDGDFAPDVYWNSTEFLAWLYNDSPVKDHVVTNDRWGTGIRCHHGGFYSCSD
KYNPGVLQHHKWENCMTIDRHSWGYRRNANIQDYLTIHDIISTFASTISCGGNMLMNVGP
TKAGMISPVFQDRLREFGSWLKVNDRLYQGENFVLLSLIHLNVDNLF
Nucleotide sequence
Length: 1,472
>KH2012:KH.L65.9.v1.A.SL1-1
AAGCATGTTAAAGTATACATCAATTGCATTCTTCTTCGCTTATGTGGCGTTTGCTGCTGC
ATTTGAAGAAACATCTCTTCGTGAAATTTTAGTAGAGGAAAATGTGGTAGAATTTACTAA
AGAAGAAATACCACTGGTTAATGATGAAAAGCAAAACACAAAAAGATACGAACCAACGTG
GAAGTCAATAGACTCACGTCCACTACCGAGCTGGTTTGATGAAGCAAAGTTTGGCATTTT
TATTCACTGGGGTGTTTTCTCTGTTCCAAGTTTTGGCAATGAGTGGTTTTGGTGGAATTG
GAAAGGAACAAAAAATGCAGCAATCGTTAATTTCATGAAACGAAACTACCCCCCAGATTT
TACATACCCAGATTTTGCGAAAGAATTTACAGCTGAGTTGTTCCAACCTAATGAATGGGC
AGATTTGTTTAAAGATTCTGGGGCCCAGTACATTGTCCTTACCAGCAAGCACCATGAAGG
CTACACCAACTGGCCTTCTAATGTTTCATGGAATTGGAACTCAATGGATGTCGGCCCACA
TCGTGATTTAGTTGGTGACCTGGCATCCTCCATAAGAAATCGCACAAATCTAAAGTTTGG
GGTTTACCATTCGTTGTTTGAGTGGTTTCACCCACTCTATATACAGGACAAAGCTGGCCA
TTTCAAAAGTCAAAGTTTCGTCGCAAGGAAGTCGATGCCTGAGTTGTACGAGCTTGTTAA
TAAATACAAGCCTGACATCGTGTGGTCCGATGGTGACTTTGCGCCCGATGTTTATTGGAA
TTCGACCGAATTTTTAGCTTGGTTGTATAATGATAGTCCTGTAAAGGACCACGTGGTTAC
CAACGACAGATGGGGAACTGGCATCCGTTGTCATCATGGAGGATTCTACTCTTGTTCCGA
TAAATATAACCCTGGTGTTTTACAACATCATAAATGGGAGAACTGCATGACAATTGATCG
TCATTCATGGGGATATAGAAGAAATGCTAACATACAGGATTACTTAACTATACATGATAT
TATTTCAACATTTGCTTCGACTATTAGTTGTGGTGGGAACATGCTTATGAATGTAGGGCC
AACCAAGGCTGGTATGATTTCCCCTGTGTTTCAAGATAGACTGAGGGAGTTTGGAAGTTG
GCTCAAAGTGAACGATCGTCTTTATCAGGGCGAAAATTTTGTGCTTTTGAGTCTCATTCA
CCTTAATGTAGACAACCTGTTTTAGAACTTTAAAACCATTGTATGCAAAGAATGCCAGAG
GGGGTATAGAAAACCAATGTAATAAACCGCAGTACGTTTGAGTATGTTACAAACATTACA
ATCATCATTTTTAATAAATAGCAGTTGCACATCGTATTATTCCCAATTTATCATTTCATT
TGCAGAATTTTTTTTGCGTTCTATATTGACCATGTTTTGTAATTACTAAGCATATGCAGA
TCCTAAATACACATTGCTGTAAAACTCTCTCA
| PIRSF |
FUC_metazoa-typ (IPR016286) - T[29-388] 2.4E-112 |
| Pfam |
Glyco_hydro_29 (IPR000933) - T[47-385] 1.3E-119 |
| PANTHER |
Glyco_hydro_29 (IPR000933) - T[51-388] 6.3E-190 |
| SMART |
Glyco_hydro_29 (IPR000933) - T[55-399] 7.7E-198 |
| SUPERFAMILY |
Glycoside_hydrolase_SF (IPR017853) - T[55-385] 2.32E-110 |
| PRINTS |
FUC_metazoa-typ (IPR016286) - T[111-126] 2.4E-57 - T[150-166] 2.4E-57 - T[169-187] 2.4E-57 - T[237-253] 2.4E-57 - T[264-285] 2.4E-57 - T[339-360] 2.4E-57 - T[372-394] 2.4E-57 |
| ProSitePatterns |
Glyco_hydro_29_CS (IPR018526) - T[304-315] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FUCO2_HUMAN | 64.179 % | 478 | 7.67E-168 |
| FUCO_HUMAN | 62.09 % | 471 | 3.13E-165 |