Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.L71.18.v1.A.SL1-1

Possible name(s)

RAB11A; RAB11B; RAB4A

Gene model

KH2012:KH.L71.18

Location

KhL71 [83,825 / 86,469]

Sequences

Amino acid sequence

Length: 265

>KH.L71.18.v1.A.SL1-1
LKALESVLNIKYSKEMTYSQECKYDQVMKVLLIGDPGVGKTQIVNKFTRDQFDDDVKPTV
GVEYVTKVIHVKGKVVCLHIWDLAGREMFRSITNAYYHGAVGALIVYDITKVRTFENVSN
WFENLARTMSEYVDSPVTMMVGNKVDLRHQRSVPIETAMRVAKQRNSTFVETSALTGCDV
EKAFQRLAERIMDKLEEAELRHKVTVGGGLEVGSQSLSAQPYKEMTVDTVVQKQPKPNKF
KFSSVVEKCSENAQVCCKSLFNCFE

Nucleotide sequence

Length: 1,017

>KH2012:KH.L71.18.v1.A.SL1-1
ATATCTTAGTTAAAAGCGCTTGAATCTGTATTAAATATAAAGTACAGTAAAGAGATGACG
TACAGCCAAGAATGCAAATACGACCAGGTAATGAAAGTCTTACTGATCGGGGATCCCGGG
GTGGGGAAAACCCAGATTGTTAACAAATTCACACGTGACCAGTTTGATGATGACGTCAAG
CCCACTGTTGGTGTTGAATACGTCACAAAGGTGATTCACGTGAAGGGAAAAGTCGTTTGT
TTGCATATCTGGGATTTGGCGGGAAGAGAAATGTTCAGAAGCATAACAAACGCTTATTAC
CACGGAGCGGTTGGAGCGCTTATCGTCTATGACATCACAAAGGTTCGAACGTTCGAAAAC
GTTTCCAACTGGTTCGAGAACCTCGCGCGTACGATGTCAGAATACGTTGATTCACCCGTC
ACAATGATGGTTGGTAACAAGGTTGATCTACGTCATCAAAGGTCCGTTCCTATAGAAACA
GCGATGAGGGTTGCCAAGCAACGAAACTCGACGTTTGTTGAAACTTCCGCCCTAACAGGA
TGTGACGTAGAGAAAGCTTTCCAACGGTTAGCGGAGAGGATAATGGACAAGTTGGAGGAA
GCGGAACTTCGACATAAAGTGACTGTGGGTGGTGGGCTCGAAGTGGGATCACAATCGTTG
TCCGCGCAACCGTACAAAGAAATGACTGTGGACACCGTGGTACAGAAACAACCAAAGCCT
AATAAATTCAAGTTTTCTTCCGTGGTCGAGAAATGCAGCGAGAACGCGCAAGTTTGCTGT
AAAAGTCTGTTTAATTGTTTCGAATAATGGGTGCTATGACGTCACAATGAATAATCGAAC
GCTTTGTCGTCTTAAGTATTTTTAATATTTCTATTTTTATATTAAAATATGTTGCAATGT
CGTTGTTTTTAGCTGCCACCTTTTGTTCATTTTAAATTTTAAAAGTCGTTTCTATACGTT
GTTGCCAATCTGTATAATTGTCGTCGTTGCGGAAATAAAATGAAAGAAATGTTTTAA

InterProScan

SUPERFAMILY	P-loop_NTPase (IPR027417) - T[23-199] 1.89E-51
TIGRFAM	Small_GTP-bd_dom (IPR005225) - T[26-185] 2.5E-27
Pfam	Small_GTPase (IPR001806) - T[29-192] 3.6E-51

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RB11A_HUMAN	48.276 %	172	1.38E-53
RB11B_HUMAN	48.276 %	174	2.79E-54
RAB4A_HUMAN	42.784 %	162	1.17E-49