- Transcript 'KH2012:KH.L71.26.v1....'
Transcript Model
Transcript Id
KH2012:KH.L71.26.v1.R.ND1-1
Possible name(s)
AVPR1A; AVPR1B; GNRHR
Gene model
Location
KhL71 [51,662 / 57,907]
Amino acid sequence
Length: 423
>KH.L71.26.v1.R.ND1-1
LTILGLWFRFSFMMTSPTMTSNITGCNVTSTYSPEFIIDNQYDCDAMFESFLSSQRLVFD
SYHLTRIWVTWVIFFISLAGNLTVLVSVTVMRKTQSYSHCQLIMTHLSLANLAFTLFILP
MDAIWNYTLEWLAGDVMCRVMNSLKQFAMYISSAMIMVMGVDRVTGLLRPVSANQQRRRI
VKFLTVAWVFSFINSIPPSVMFSAGPYWPMRCECPNHYVVQCVDFHLIKKGREIFYIYSM
FISFFIPLYCIIICYLIIAFSIAKMAKRAKATELQSSGFRPPSSRKSLARRSLQRAKKIS
QLVTGLITITFVICWGPYYVVGLMHWFNEQRIERLPEGIMLMSLYLNPCLHPFITVCLMK
EIRENICRKPNCSLATPRFLLNETDRTQLSTATKREKRNRIIVSKFKKDSNKVTLIDEQP
RDV
Nucleotide sequence
Length: 1,758
>KH2012:KH.L71.26.v1.R.ND1-1
CTCACAATTCTAGGTTTGTGGTTTCGTTTTAGTTTCATGATGACGTCACCAACTATGACG
TCAAACATCACTGGATGTAATGTGACGTCAACATATTCACCGGAATTCATTATTGACAAC
CAATACGATTGTGACGCAATGTTTGAGAGCTTCTTATCCAGCCAGAGGTTGGTTTTCGAT
TCATACCACCTGACCCGTATTTGGGTCACGTGGGTTATCTTCTTCATCTCATTGGCTGGG
AATCTAACCGTGCTCGTCAGCGTCACCGTGATGAGGAAAACACAGTCGTACAGTCATTGT
CAGTTGATTATGACGCATCTGTCTCTGGCTAACCTTGCGTTTACTTTGTTTATATTACCT
ATGGATGCAATTTGGAATTACACGCTTGAGTGGTTAGCAGGTGACGTCATGTGTCGTGTC
ATGAACTCACTCAAGCAATTCGCGATGTATATTTCGTCGGCTATGATTATGGTAATGGGG
GTAGACAGGGTCACCGGGTTATTACGCCCAGTATCAGCGAACCAACAGCGACGACGAATC
GTTAAGTTTCTCACAGTAGCTTGGGTGTTCAGTTTCATCAATTCCATTCCCCCGTCGGTG
ATGTTCTCTGCTGGCCCCTACTGGCCAATGCGTTGCGAATGTCCCAACCACTATGTGGTG
CAATGCGTCGACTTTCATTTGATAAAGAAAGGGCGTGAAATCTTCTACATTTACTCGATG
TTCATTTCCTTCTTCATTCCATTGTATTGCATCATCATATGTTACCTCATAATCGCATTC
TCAATAGCGAAGATGGCGAAGAGGGCAAAAGCAACCGAACTCCAATCTTCTGGCTTCCGT
CCTCCTTCGAGTCGTAAAAGTTTGGCGCGCCGAAGTTTACAGCGAGCTAAGAAGATCTCT
CAACTGGTGACCGGGCTCATCACCATCACATTCGTTATTTGTTGGGGACCTTACTATGTT
GTTGGGTTGATGCATTGGTTTAATGAACAACGTATTGAACGTTTGCCTGAGGGGATAATG
TTAATGTCATTGTATTTGAACCCGTGTCTCCACCCCTTCATCACTGTTTGTTTGATGAAG
GAGATCCGAGAAAATATTTGTCGGAAACCGAACTGTAGCCTTGCTACTCCAAGATTTCTA
TTGAATGAGACGGACCGCACCCAGCTCAGCACCGCCACCAAGCGGGAGAAACGCAACCGA
ATCATCGTCAGCAAATTCAAGAAAGATTCCAATAAAGTCACACTGATTGATGAGCAGCCA
AGAGATGTGTAAGCGACCAACTCACAGACCATAAGACCTTGTGTACAAACAGTATTACGT
CACCGTGACGTAAGGAGTCTGTGCGCTTCTCAGTCGTGTATAATTTTATTGTTACGTCAT
GTGTGATCTGTGTCGTCATAAAGAAATAAAATGTTTGAATGCACAAAGTTCTCGAACAAG
AGAACAAAGCTCTAATCAATGTGCACGTAGAAAATATAGATTGTGCAACATAGAGATCAT
GCGTGGCAATAGAAACAAAATTACAACAACCTTTATTTTTATTAAATAAAGTAAACAATA
ATTACGCGGTTAGTAGAAGCTGCTACGGGATAAGATTCAATTAAAATGTCCATACAATAT
TGCAACGATTTTAAACCATTTAAGCACGTACAAATGGCGGTCAAAAGTTGGTTGAACACG
TATTGTCATTATATGTAATGTGAACTATACTTGTTTCTGATCAAAATAGCAAAGAATAAA
TACAGTGTAACATTTTTA
| PRINTS |
GPCR_Rhodpsn (IPR000276) - T[65-89] 6.2E-21 - T[100-121] 6.2E-21 - T[145-167] 6.2E-21 - T[179-200] 6.2E-21 - T[236-259] 6.2E-21 - T[300-324] 6.2E-21 - T[337-363] 6.2E-21 |
| ProSiteProfiles |
GPCR_Rhodpsn_7TM (IPR017452) - T[80-355] 32.348 |
| Pfam |
GPCR_Rhodpsn (IPR000276) - T[80-354] 5.2E-39 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GNRHR_HUMAN | 26.822 % | 133 | 1.9E-35 |
| V1AR_HUMAN | 24.267 % | 95.9 | 1.27E-21 |
| GNRR2_HUMAN | 29.339 % | 100 | 6.81E-24 |