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TRANSCRIPT CARD

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  1. Clone 'cien202581' > 
  2. EST 'AHC0AAA197YJ17_RM1' > 
  3. Transcript 'Boschl.CG.Botznik201...' > 
  4. Transcript 'KH2012:KH.L7.7.v1.C....'

Transcript Model

Transcript Id

KH2012:KH.L7.7.v1.C.SL2-1

Possible name(s)

LHCGR; RXFP1; RXFP2

Gene model

KH2012:KH.L7.7

Location

KhL7 [24,845 / 32,085]

Sequences

Amino acid sequence

Length: 326

>KH.L7.7.v1.C.SL2-1
RSAVHTFSSRYHLIANPILRVFVWIMGVLAVGGNLIVIVGEVLECKNMKKRDFASLRANH
IFVLNLAVADLLMGVYLIILGGVGVLYQGRYCIDKYTWLTSALCSNIGVLVVVSSETSVV
TMVILTSFRVYATYNVKAILFGCLCHRITFWLVQHLTHIIFSQHFYPRYYSDNSVCIPKL
YVKHSDAAWGFSLAVSIFNFFSFIYVLVAYFAIYLKSSKSLLLHSKGKQQSMISKKNAAM
QRKIIRLIITDFCCWVPISIMAFLSIGGYDIPSVVYSVSAIILLPINSALNPLLYSNFVD
KVIDRMKKKPERQVSQSSETLQSTRV

Nucleotide sequence

Length: 2,115

>KH2012:KH.L7.7.v1.C.SL2-1
GGTTAAATGAGTTTCATTCGTTTAACATGAATTTGTATTTGTCTCTTCGAATACGACAGT
GAGGATCAAATTAATCAAAACAACGATAGAAGGGAATTAGCAGCAAAACTACAGTCTTAC
AATCTACGTCTACAACAATTTGAAAGTGTCAAATAAAAGCGTGGCTGCTAAACCCATTAT
TACGTGGTTAGTTTTAGAATATTAACAATTGGAAGACAATGGGCTCTAGTGTTTGTTAAG
TTGCAGTAATGATGGCAGTTGTATGTTTTATCGTCTTCATCACTCACGCAATATTAATGG
ATAGAACAAGCGCTCATAACCTCCCAGGGTCAACGCTGAACAATACCTTGTGTCTGGATT
GCGATGTCAGTTGCAGAACTAGCGGAACAGCAGATACACAACTCCGTTGTTTTAGCACGG
GTGTTCTGTTTCATACACCTCGTGCCCGCTTACGAGTTACCACGTATGTAAATTATTTAT
CCTCGCATGAAAGACAAGATATTCGTAGCATGCACGGTGCTACACTGGATGAAGGGAAAT
GCTTTGAATGTTTGGATCACACAATGATTATTCCTTGGGATAAAGTTTGTGACGACGTGA
TGGATTGTAGCGACCAATCAGATGAATGCTTATGTGAGGCACGGACCTGATGACGTTGCA
TTATGTAAGCTCGGTGAAGTATCTTGTGGGGGAGGTGTTTGTATCTCTAGATCAGAGGTG
TGTGATTCATATCCACAATGTAGCGATAAAAGAGATGAGAGCAACGCAACCGCCTCATTG
GTCAGCCATGGTGTGACATCATCAAGGTGGTGTGATGGTACGCTAGATTGCAGCTCGGGG
CAAGATGAGTATTTGGCTTCCTGTAACCAGACGAGGTTCTTCTGTGATGTCATAGACGGC
AAAGTTAGCATTCCATTGTCCAAGGTTTGTGATGGAACAATGGATTGTATTGGGGGGCAA
GATGAATCAGATTGTGTGGGGCGGTTCAGGTGCGACGTACTTAGTGGGACTAAGGTGGGT
TCCTTATATTTAAAGATAACAATATTACCTTTACGTTTGTGATTACAACATCAACTGCGA
CGATGGAGAAGATGAAATGGATTGTCGAGATGGGAGGTTTTATTGTGAGAATAAAGATCC
GCTGTTCACACATTTTCATCGAGATATCATTTGATCGCAAACCCGATACTTCGTGTGTTT
GTGTGGATTATGGGGGTGTTAGCTGTTGGGGGAAATCTGATAGTGATCGTTGGTGAAGTA
TTGGAATGCAAGAACATGAAGAAACGAGATTTCGCGTCACTTCGTGCGAATCATATCTTT
GTGCTAAACCTTGCTGTTGCCGATCTATTGATGGGAGTGTATTTGATTATATTGGGTGGC
GTGGGTGTGTTATATCAGGGCAGATACTGCATAGATAAATATACATGGCTTACAAGTGCG
TTGTGTTCAAACATTGGCGTCCTTGTTGTTGTATCGAGCGAAACATCAGTGGTGACAATG
GTGATTCTTACTTCATTCAGGGTTTATGCTACGTACAATGTAAAAGCTATTTTATTTGGC
TGTCTATGTCACCGCATTACTTTTTGGCTTGTTCAACATCTTACCCACATCATATTTTCA
CAACATTTTTATCCCAGGTATTACAGCGACAACAGCGTTTGTATCCCAAAGTTATACGTA
AAACACAGCGATGCTGCGTGGGGATTCTCGTTGGCGGTCTCAATATTTAACTTCTTCTCA
TTTATCTACGTTTTGGTGGCTTATTTCGCTATTTATTTAAAGTCCAGTAAAAGTTTGTTG
CTTCACTCAAAGGGAAAACAACAAAGCATGATCTCGAAGAAGAATGCAGCCATGCAAAGG
AAGATCATCCGTTTAATCATCACCGACTTTTGTTGTTGGGTTCCCATCTCCATCATGGCC
TTCCTCAGCATTGGTGGTTATGATATCCCATCCGTCGTGTACTCAGTGTCGGCCATTATC
CTGCTTCCCATCAACAGCGCTCTCAATCCACTTCTGTACTCAAACTTTGTGGATAAAGTA
ATTGATAGAATGAAGAAAAAGCCGGAACGCCAAGTCTCGCAAAGTTCTGAGACTTTGCAG
AGCACACGTGTGTGA

InterProScan

PANTHER
TSHR/LHCGR/FSHR (IPR034298) - T[5-318] 3.1E-82
PRINTS
GPCR_Rhodpsn (IPR000276) - T[18-42] 4.9E-15 - T[59-80] 4.9E-15 - T[111-133] 4.9E-15 - T[240-264] 4.9E-15 - T[277-303] 4.9E-15
ProSiteProfiles
GPCR_Rhodpsn_7TM (IPR017452) - T[33-295] 15.858
Pfam
GPCR_Rhodpsn (IPR000276) - T[57-295] 6.7E-13

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
LSHR_HUMAN 27.986 % 89.7 1.0E-19
RXFP2_HUMAN 27.848 % 122 5.69E-31
RXFP1_HUMAN 30.435 % 130 1.72E-33