Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 1,049

>KH.L81.2.v1.A.nonSL5-1
RNNTTTMLIDLDNPVINLSPQDVATRPEYLPLNKRSPRFHPSLPPTPEAAPRSYCSLPTA
LRRYDVTERSCVITQSDVTIRNSSGKCCNWLVHKWRHLFGKTPKRDVSVLCDVTKYHVTS
PKTSRKLTNGFRRRAATAPSMSIFGQENKREWGIERHDDVIYAVMLKRIHQSPHSGASDG
LLWETHKVRYIKAATLQHLVAHLCNIDDVGERNYVTVFLATYRSFATADDVVKLVIEEWN
KTKKDSAQKRISLFRSIERLLRTWLKRHFNDDFYHPPECALLHKLLRFVNDCLNDIPGYD
ITTKGDDIITFLRSKVNEVELQRFQEKCLEELNYLPFSSIDDVTNDPIVNDNAAKTLLDI
FTSVHVAEQLTIKDANLFMRTVPHHCLTAVRSSKGKPPSVRATIDEFNKVVYCVLGTTLC
TTLKLQQRSKMLSKWIEIAQECRELKNFSSLRAIVSGLQTHALHRLKRAWQGVPHTHVEL
LHELSDINMKDLIMKVGTAKVNTERSGIMRWDKDALSRRQRAARSGIMLGTVPYLGSFLT
DLTYLHTAKPDYVENDLINFDKRRKEFEYLAQLQLWQVSCRSYQHIEKDELFCDWFDSVA
LPDDEQANILSKQVEPPTTPVSPAGIPLKRSISEMFPGNNSAFTQPYHVRSHSNDINERI
PTNVTSSDPETRFINVRIIRKGNEGGIPETKNMTLTINDRSHATIKQATKLFDIDDESAK
FSLSQILEDNKELKIPDTANVYYAMQSSCTNFNFALMEDGAEYSKIPLPPPSDSPSPKKK
GHRKTPSFSSQTSPMKSIYKHLSIGGISLVSGSYSPARESTKHENSFETQVLRHQLSPRR
GGMSVHDGSHTPSSDSDDSGDESAWWRKRVKKLVHGKGHKRNSSDSSRSVESFLEKFEKP
RLYDCDITDDCYVTDKSASLPRSRVSSASTAYSWTRRRVVRKHNSQPRSSYVRDTMRHQL
QTSESRSKFHLPDPAHRSSVSMEPINENNERNKPTYTRSASNPCVLDLLQDNVFGETNPP
TIIVHCPSPRKQATKPRTPSSSSGETTYL

Nucleotide sequence

Length: 3,715

>KH2012:KH.L81.2.v1.A.nonSL5-1
GTTGTTGGTTGGTATGTAAGGTAGCATGGTGTATTGGTAGCCATGGGTTTTTGAGGGTGG
ATGTATGATGTTATTATCGTATCTATGTGTGTGTGTGTGTTGTATTGGTAGCTATGCATG
TACGTGCGTCGGTTAGAAGCAACCACAAGTTAGAGGCAGGGCGTTATATATAGCAGTGAA
TATTGTCTTTGTGAGGATTTAAGGTTTTCCTACTTGTAAGGTGTGGTGGTGTTTGCTGCT
TAGTTAAACTTCGCATATCATTCATGGTTGTCGATATGTTGATTATGATGTCACATACGT
ACTATTGTTAAAGAGAAATAAGTTGGATTGTGACGTAACTGAGCTTTCCACGAAAACAAT
GAATATGTCGTGACAATGCGTCGTGTCGACATATCGTTCGAATAATGATCATTGTTTATT
GTGATGTCATAAAAAAGGTTTTGATGCAGATGAAACAATAGGCATTAATATCAAACAATC
ATGTTTGTGACGTAACAATACAACAACAATGCTGATAGACTTAGACAATCCTGTGATAAA
TCTTTCACCGCAAGATGTCGCCACACGACCAGAATATTTACCCCTAAATAAAAGGAGTCC
CCGATTCCACCCTTCCTTGCCCCCAACCCCCGAAGCCGCACCCAGGTCGTATTGTAGCTT
ACCCACGGCGTTACGTAGATATGACGTCACAGAAAGGTCCTGCGTCATTACGCAAAGTGA
CGTCACGATACGTAATTCTAGCGGGAAATGCTGTAATTGGCTGGTCCATAAATGGCGCCA
TTTATTCGGGAAAACACCGAAACGTGACGTCTCCGTGTTGTGTGACGTCACAAAATATCA
CGTGACGTCACCAAAGACTTCTCGAAAACTGACAAACGGGTTTCGAAGGCGGGCCGCGAC
AGCGCCTTCAATGTCCATATTTGGACAGGAGAATAAAAGAGAATGGGGCATTGAACGTCA
TGATGACGTCATATATGCTGTAATGTTAAAGCGAATCCATCAAAGTCCTCATAGTGGGGC
ATCGGACGGATTACTTTGGGAAACTCATAAAGTTCGATATATTAAAGCTGCAACATTACA
ACACTTGGTGGCGCATCTGTGTAATATTGATGACGTAGGAGAGAGGAATTACGTTACTGT
GTTCCTTGCAACGTACAGGTCGTTCGCTACCGCTGATGACGTCGTCAAACTCGTTATAGA
AGAATGGAACAAAACAAAAAAGGATTCTGCGCAAAAAAGAATTTCATTATTCAGATCGAT
CGAGCGTTTATTACGAACATGGTTGAAACGACATTTCAACGATGACTTCTACCATCCACC
AGAGTGCGCTCTACTCCACAAACTTCTTCGTTTCGTCAACGATTGTTTAAACGATATACC
TGGTTATGACATCACAACTAAGGGTGATGACATCATCACTTTCTTGAGGTCAAAGGTCAA
CGAGGTGGAACTTCAAAGATTTCAAGAGAAATGTTTGGAAGAGTTGAATTATCTCCCATT
CTCTTCCATTGATGATGTCACAAACGACCCCATTGTTAACGACAATGCAGCGAAAACATT
ACTGGATATTTTCACTTCTGTTCATGTGGCTGAGCAACTTACTATCAAAGATGCAAACCT
TTTCATGCGCACGGTTCCGCATCATTGCTTAACTGCCGTGAGGTCATCAAAGGGGAAACC
CCCTTCTGTGAGAGCTACCATTGATGAATTCAACAAAGTAGTTTACTGCGTGTTGGGCAC
GACATTATGTACGACACTCAAGTTGCAACAGCGATCAAAGATGTTAAGCAAATGGATTGA
AATAGCGCAGGAATGTCGTGAGTTGAAGAACTTCTCCTCGTTACGAGCGATAGTATCCGG
ATTACAAACCCACGCGTTGCATCGATTGAAGAGGGCGTGGCAGGGCGTGCCTCATACGCA
CGTCGAGCTACTACATGAGTTAAGCGATATTAATATGAAGGATTTAATAATGAAGGTTGG
CACAGCCAAAGTGAACACAGAAAGGAGCGGGATAATGCGTTGGGATAAAGATGCGTTGTC
ACGGCGCCAACGTGCGGCACGGTCCGGTATCATGCTTGGCACGGTGCCGTACCTTGGATC
TTTCCTCACTGATCTAACTTATCTACATACTGCTAAACCTGATTATGTTGAGAATGACCT
TATCAACTTTGACAAGCGACGTAAAGAATTTGAATATTTGGCCCAGCTTCAATTATGGCA
GGTATCATGTCGTAGCTACCAACATATTGAGAAGGACGAGCTGTTCTGTGATTGGTTCGA
TTCTGTGGCCCTCCCCGACGATGAACAAGCGAACATTTTATCGAAACAAGTTGAACCTCC
TACTACACCTGTATCACCTGCGGGGATTCCCCTTAAAAGATCAATATCAGAGATGTTTCC
CGGCAACAACAGCGCGTTCACTCAACCATATCATGTACGTTCCCATAGCAACGATATCAA
CGAGAGAATCCCAACGAACGTCACGAGCTCCGATCCTGAGACTCGTTTCATCAACGTCAG
GATAATTCGGAAAGGCAACGAAGGGGGAATCCCCGAAACCAAGAACATGACGTTAACCAT
CAACGATCGCTCGCACGCTACGATCAAGCAAGCAACGAAATTGTTTGATATTGATGATGA
GTCGGCAAAGTTTTCGCTGAGTCAGATATTAGAGGATAATAAAGAGTTAAAGATCCCCGA
TACAGCGAACGTATATTACGCAATGCAAAGTTCATGCACCAACTTTAACTTTGCGTTAAT
GGAGGACGGAGCTGAATATTCAAAGATTCCTCTACCTCCCCCTAGTGACAGCCCATCCCC
CAAAAAGAAAGGCCATCGAAAAACGCCAAGTTTTTCCAGTCAAACTTCACCCATGAAAAG
TATTTACAAACATTTATCTATTGGGGGGATTTCCCTTGTTAGTGGCTCGTATTCCCCAGC
GAGGGAAAGTACCAAACATGAGAACTCATTTGAAACCCAAGTGTTGCGCCATCAGTTGTC
GCCTCGTAGAGGGGGCATGTCGGTACATGATGGCTCACATACACCATCTAGTGACAGTGA
TGATAGTGGTGATGAATCAGCATGGTGGCGTAAGAGAGTCAAGAAGTTGGTTCACGGCAA
AGGTCATAAACGAAATAGTTCCGATTCATCTCGTTCTGTGGAATCTTTCCTCGAAAAATT
CGAGAAGCCTCGTTTGTACGATTGTGACATCACAGATGATTGTTACGTCACAGACAAGTC
AGCGAGTTTACCGCGCAGTCGAGTTTCATCTGCGTCGACCGCGTATTCATGGACGAGACG
ACGAGTGGTGCGCAAACATAACAGCCAACCCAGAAGTTCATATGTTCGTGATACGATGAG
ACACCAACTCCAAACATCCGAATCGCGATCAAAGTTCCATCTGCCCGACCCCGCACATAG
GAGCAGTGTTTCCATGGAACCCATCAATGAAAACAATGAACGTAACAAACCTACGTACAC
AAGATCAGCGAGCAACCCTTGTGTGTTGGATCTACTGCAAGATAATGTGTTTGGTGAAAC
AAACCCGCCCACTATAATAGTACATTGCCCATCACCTCGCAAACAAGCAACTAAACCGCG
CACTCCCTCATCATCATCAGGGGAAACAACTTATTTATAAACTTTTGGTGCAATAAGCCA
TACATGTGCAATAATACTTTATTAACATCACAGTGATTACAAGATTATTCGTTAA

InterProScan

SUPERFAMILY	Ras_GEF_dom_sf (IPR023578) - T[181-620] 6.54E-85
SMART	Ras-like_Gua-exchang_fac_N (IPR000651) - T[186-316] 6.1E-11
ProSiteProfiles	Ras-like_Gua-exchang_fac_N (IPR000651) - T[187-313] 21.532
Pfam	Ras-like_Gua-exchang_fac_N (IPR000651) - T[191-287] 1.8E-13
CDD	Ras-like_Gua-exchang_fac_N (IPR000651) - T[195-296] 1.65147E-16
Gene3D	RASGEF_cat_dom_sf (IPR036964) - T[341-618] 1.9E-77
SMART	RASGEF_cat_dom (IPR001895) - T[358-618] 1.4E-62
CDD	RASGEF_cat_dom (IPR001895) - T[358-610] 2.26566E-53
ProSiteProfiles	RASGEF_cat_dom (IPR001895) - T[362-617] 45.387
Pfam	RASGEF_cat_dom (IPR001895) - T[365-564] 3.4E-44
ProSitePatterns	Ras_G-nucl-exch_fac_CS (IPR019804) - T[532-562] .
ProSiteProfiles	RA_dom (IPR000159) - T[672-761] 8.989
SUPERFAMILY	Ubiquitin-like_domsf (IPR029071) - T[684-756] 2.07E-11