- Transcript 'KH2012:KH.L135.2.v5....' >
- Transcript 'KH2012:KH.L81.2.v2.R...'
Transcript Model
Transcript Id
KH2012:KH.L81.2.v2.R.ND1-1
Possible name(s)
RALGDS; RGL1; RGL3
Gene model
Location
KhL81 [8,073 / 17,336]
Amino acid sequence
Length: 938
>KH.L81.2.v2.R.ND1-1
RNRSSFLPSYCDVIMVMLSSVTSQSASANSSGDETENKREWGIERHDDVIYAVMLKRIHQ
SPHSGASDGLLWETHKVRYIKAATLQHLVAHLCNIDDVGERNYVTVFLATYRSFATADDV
VKLVIEEWNKTKKDSAQKRISLFRSIERLLRTWLKRHFNDDFYHPPECALLHKLLRFVND
CLNDIPGYDITTKGDDIITFLRSKVNEVELQRFQEKCLEELNYLPFSSIDDVTNDPIVND
NAAKTLLDIFTSVHVAEQLTIKDANLFMRTVPHHCLTAVRSSKGKPPSVRATIDEFNKVV
YCVLGTTLCTTLKLQQRSKMLSKWIEIAQECRELKNFSSLRAIVSGLQTHALHRLKRAWQ
GVPHTHVELLHELSDINMKDLIMKVGTAKVNTERSGIMRWDKDALSRRQRAARSGIMLGT
VPYLGSFLTDLTYLHTAKPDYVENDLINFDKRRKEFEYLAQLQLWQVSCRSYQHIEKDEL
FCDWFDSVALPDDEQANILSKQVEPPTTPVSPAGIPLKRSISEMFPGNNSAFTQPYHVRS
HSNDINERIPTNVTSSDPETRFINVRIIRKGNEGGIPETKNMTLTINDRSHATIKQATKL
FDIDDESAKFSLSQILEDNKELKIPDTANVYYAMQSSCTNFNFALMEDGAEYSKIPLPPP
SDSPSPKKKGHRKTPSFSSQTSPMKSIYKHLSIGGISLVSGSYSPARESTKHENSFETQV
LRHQLSPRRGGMSVHDGSHTPSSDSDDSGDESAWWRKRVKKLVHGKGHKRNSSDSSRSVE
SFLEKFEKPRLYDCDITDDCYVTDKSASLPRSRVSSASTAYSWTRRRVVRKHNSQPRSSY
VRDTMRHQLQTSESRSKFHLPDPAHRSSVSMEPINENNERNKPTYTRSASNPCVLDLLQD
NVFGETNPPTIIVHCPSPRKQATKPRTPSSSSGETTYL
Nucleotide sequence
Length: 2,959
>KH2012:KH.L81.2.v2.R.ND1-1
ATTGTGACGTATCTATAGGTAGTTATTACGTTAATAATAGAAGATTAGGATACTATGGAT
ATTATGACGTAACAGAAGCAGTTTCTTACCATCGTACTGTGATGTCATAATGGTAATGTT
GTCGTCTGTGACGTCACAATCAGCGAGCGCGAATTCTTCCGGAGATGAAACGGAGAATAA
AAGAGAATGGGGCATTGAACGTCATGATGACGTCATATATGCTGTAATGTTAAAGCGAAT
CCATCAAAGTCCTCATAGTGGGGCATCGGACGGATTACTTTGGGAAACTCATAAAGTTCG
ATATATTAAAGCTGCAACATTACAACACTTGGTGGCGCATCTGTGTAATATTGATGACGT
AGGAGAGAGGAATTACGTTACTGTGTTCCTTGCAACGTACAGGTCGTTCGCTACCGCTGA
TGACGTCGTCAAACTCGTTATAGAAGAATGGAACAAAACAAAAAAGGATTCTGCGCAAAA
AAGAATTTCATTATTCAGATCGATCGAGCGTTTATTACGAACATGGTTGAAACGACATTT
CAACGATGACTTCTACCATCCACCAGAGTGCGCTCTACTCCACAAACTTCTTCGTTTCGT
CAACGATTGTTTAAACGATATACCTGGTTATGACATCACAACTAAGGGTGATGACATCAT
CACTTTCTTGAGGTCAAAGGTCAACGAGGTGGAACTTCAAAGATTTCAAGAGAAATGTTT
GGAAGAGTTGAATTATCTCCCATTCTCTTCCATTGATGATGTCACAAACGACCCCATTGT
TAACGACAATGCAGCGAAAACATTACTGGATATTTTCACTTCTGTTCATGTGGCTGAGCA
ACTTACTATCAAAGATGCAAACCTTTTCATGCGCACGGTTCCGCATCATTGCTTAACTGC
CGTGAGGTCATCAAAGGGGAAACCCCCTTCTGTGAGAGCTACCATTGATGAATTCAACAA
AGTAGTTTACTGCGTGTTGGGCACGACATTATGTACGACACTCAAGTTGCAACAGCGATC
AAAGATGTTAAGCAAATGGATTGAAATAGCGCAGGAATGTCGTGAGTTGAAGAACTTCTC
CTCGTTACGAGCGATAGTATCCGGATTACAAACCCACGCGTTGCATCGATTGAAGAGGGC
GTGGCAGGGCGTGCCTCATACGCACGTCGAGCTACTACATGAGTTAAGCGATATTAATAT
GAAGGATTTAATAATGAAGGTTGGCACAGCCAAAGTGAACACAGAAAGGAGCGGGATAAT
GCGTTGGGATAAAGATGCGTTGTCACGGCGCCAACGTGCGGCACGGTCCGGTATCATGCT
TGGCACGGTGCCGTACCTTGGATCTTTCCTCACTGATCTAACTTATCTACATACTGCTAA
ACCTGATTATGTTGAGAATGACCTTATCAACTTTGACAAGCGACGTAAAGAATTTGAATA
TTTGGCCCAGCTTCAATTATGGCAGGTATCATGTCGTAGCTACCAACATATTGAGAAGGA
CGAGCTGTTCTGTGATTGGTTCGATTCTGTGGCCCTCCCCGACGATGAACAAGCGAACAT
TTTATCGAAACAAGTTGAACCTCCTACTACACCTGTATCACCTGCGGGGATTCCCCTTAA
AAGATCAATATCAGAGATGTTTCCCGGCAACAACAGCGCGTTCACTCAACCATATCATGT
ACGTTCCCATAGCAACGATATCAACGAGAGAATCCCAACGAACGTCACGAGCTCCGATCC
TGAGACTCGTTTCATCAACGTCAGGATAATTCGGAAAGGCAACGAAGGGGGAATCCCCGA
AACCAAGAACATGACGTTAACCATCAACGATCGCTCGCACGCTACGATCAAGCAAGCAAC
GAAATTGTTTGATATTGATGATGAGTCGGCAAAGTTTTCGCTGAGTCAGATATTAGAGGA
TAATAAAGAGTTAAAGATCCCCGATACAGCGAACGTATATTACGCAATGCAAAGTTCATG
CACCAACTTTAACTTTGCGTTAATGGAGGACGGAGCTGAATATTCAAAGATTCCTCTACC
TCCCCCTAGTGACAGCCCATCCCCCAAAAAGAAAGGCCATCGAAAAACGCCAAGTTTTTC
CAGTCAAACTTCACCCATGAAAAGTATTTACAAACATTTATCTATTGGGGGGATTTCCCT
TGTTAGTGGCTCGTATTCCCCAGCGAGGGAAAGTACCAAACATGAGAACTCATTTGAAAC
CCAAGTGTTGCGCCATCAGTTGTCGCCTCGTAGAGGGGGCATGTCGGTACATGATGGCTC
ACATACACCATCTAGTGACAGTGATGATAGTGGTGATGAATCAGCATGGTGGCGTAAGAG
AGTCAAGAAGTTGGTTCACGGCAAAGGTCATAAACGAAATAGTTCCGATTCATCTCGTTC
TGTGGAATCTTTCCTCGAAAAATTCGAGAAGCCTCGTTTGTACGATTGTGACATCACAGA
TGATTGTTACGTCACAGACAAGTCAGCGAGTTTACCGCGCAGTCGAGTTTCATCTGCGTC
GACCGCGTATTCATGGACGAGACGACGAGTGGTGCGCAAACATAACAGCCAACCCAGAAG
TTCATATGTTCGTGATACGATGAGACACCAACTCCAAACATCCGAATCGCGATCAAAGTT
CCATCTGCCCGACCCCGCACATAGGAGCAGTGTTTCCATGGAACCCATCAATGAAAACAA
TGAACGTAACAAACCTACGTACACAAGATCAGCGAGCAACCCTTGTGTGTTGGATCTACT
GCAAGATAATGTGTTTGGTGAAACAAACCCGCCCACTATAATAGTACATTGCCCATCACC
TCGCAAACAAGCAACTAAACCGCGCACTCCCTCATCATCATCAGGGGAAACAACTTATTT
ATAAACTTTTGGTGCAATAAGCCATACATGTGCAATAATACTTTATTAACATCACAGTGA
TTACAAGATTATTCGTTAA
| SUPERFAMILY |
Ras_GEF_dom_sf (IPR023578) - T[70-509] 4.45E-85 |
| SMART |
Ras-like_Gua-exchang_fac_N (IPR000651) - T[75-205] 6.1E-11 |
| ProSiteProfiles |
Ras-like_Gua-exchang_fac_N (IPR000651) - T[76-202] 21.532 |
| Pfam |
Ras-like_Gua-exchang_fac_N (IPR000651) - T[80-176] 1.6E-13 |
| CDD |
Ras-like_Gua-exchang_fac_N (IPR000651) - T[84-185] 1.79631E-16 |
| Gene3D |
RASGEF_cat_dom_sf (IPR036964) - T[230-507] 1.5E-77 |
| CDD |
RASGEF_cat_dom (IPR001895) - T[247-499] 3.16318E-53 |
| SMART |
RASGEF_cat_dom (IPR001895) - T[247-507] 1.4E-62 |
| ProSiteProfiles |
RASGEF_cat_dom (IPR001895) - T[251-506] 45.387 |
| Pfam |
RASGEF_cat_dom (IPR001895) - T[254-453] 2.8E-44 |
| ProSitePatterns |
Ras_G-nucl-exch_fac_CS (IPR019804) - T[421-451] . |
| ProSiteProfiles |
RA_dom (IPR000159) - T[561-650] 8.989 |
| SUPERFAMILY |
Ubiquitin-like_domsf (IPR029071) - T[573-645] 1.84E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RGL1_HUMAN | 36.517 % | 305 | 7.02E-91 |
| GNDS_HUMAN | 40.984 % | 213 | 2.35E-57 |
| RGL3_HUMAN | 32.397 % | 198 | 1.94E-53 |