- Transcript 'Harore.CG.MTP2014.S7...' >
- Transcript 'KH2012:KH.L8.2.v1.B....'
Transcript Model
Transcript Id
KH2012:KH.L8.2.v1.B.SL1-1
Possible name(s)
NOP56; NOP58; PRPF31
Gene model
Location
KhL8 [222,884 / 225,044]
Amino acid sequence
Length: 471
>KH.L8.2.v1.B.SL1-1
NMAPQLYVLYEHAAGYALFFVKEVEDIGSLLPTVEKAVLDFTLFASTVKLVSFLPFKSGT
NALDNVNAVSEGIVHEDLKVFLSSNIPKLQKGEVLLGINDTRISGTIQEETGIRCTTSDA
VTEILRGLRLHFPNMVKGLTMQGEAKAQLGLGHSYSRAKVKFNVNRSDNMIIQSIALLDQ
LDKDINTFSMRVKEWYSYHFPELVKISSDNFMYCRLVKAIGNRKAMAENIEEQLEEITMD
SAKAQGIISASKMSMGMDVSPIDLINIESFCSRVISLTNYKKGLVEYLHKRMQSVAPNLS
TLIGDVVGARLISHAGSLTNLAKYPASTVQILGAEKALFRALKQKGNTPKYAKKTKSKKK
KRKSEPVDLTEEPEAKKVLTENNQKSAKKKKAKKQPVDDEDVKEVEPEQMEVDTPKKKKK
KKQKEEEAATEEENEPKSAKKKKKKTKEIDAVENTEVELVLKKKKKKKVVG
Nucleotide sequence
Length: 1,878
>KH2012:KH.L8.2.v1.B.SL1-1
GTAGATTGTCATCCAAAAAATATAGAAATTTACTGGGTTTAATTTCGCCAGAAAACTTAT
AGAATATGGCTCCCCAGCTGTATGTGTTATACGAACATGCTGCTGGTTATGCTTTATTCT
TCGTTAAAGAAGTTGAAGATATTGGATCACTCTTACCTACAGTAGAGAAGGCTGTTCTAG
ACTTTACATTGTTTGCAAGCACTGTAAAGTTGGTTTCATTTCTTCCATTTAAATCTGGAA
CAAACGCCTTGGACAATGTCAATGCTGTTTCTGAAGGTATCGTTCATGAAGATCTTAAAG
TATTTCTTTCATCAAACATACCAAAGTTGCAGAAAGGTGAAGTTCTTCTTGGAATAAACG
ACACCAGGATTTCTGGAACCATTCAAGAAGAGACTGGAATTCGTTGCACAACAAGCGACG
CAGTGACAGAAATTCTTCGTGGATTGCGTTTGCATTTCCCAAACATGGTCAAAGGCTTGA
CCATGCAAGGGGAAGCTAAGGCACAGCTGGGTTTGGGACACAGCTACTCTCGAGCTAAAG
TTAAGTTCAACGTGAATAGGTCAGACAACATGATCATACAGAGCATTGCATTGTTGGACC
AACTGGATAAAGATATCAACACATTCTCTATGAGGGTGAAGGAGTGGTATTCTTATCACT
TCCCAGAGTTGGTGAAAATATCGAGTGACAACTTCATGTATTGTCGTCTTGTTAAGGCAA
TTGGTAATCGTAAAGCTATGGCGGAAAATATTGAAGAACAACTGGAAGAAATTACCATGG
ATTCAGCGAAAGCACAGGGTATTATTTCAGCCTCAAAGATGTCAATGGGAATGGATGTTT
CTCCAATTGATTTAATTAACATAGAATCATTTTGTAGCAGAGTCATATCTTTGACCAACT
ACAAAAAAGGCCTAGTTGAATATCTGCACAAAAGAATGCAGTCTGTTGCACCGAATCTTT
CAACGCTGATTGGTGATGTGGTTGGGGCAAGACTGATTTCACATGCTGGAAGTCTGACAA
ATTTGGCCAAATATCCAGCTTCTACTGTTCAAATATTGGGTGCAGAAAAAGCCCTATTTA
GGGCATTGAAACAGAAAGGCAACACACCAAAGTATGCTAAGAAAACAAAGAGCAAAAAGA
AGAAGAGAAAATCGGAACCAGTTGATCTGACAGAAGAGCCAGAAGCAAAGAAGGTTCTTA
CTGAAAATAATCAGAAAAGTGCAAAAAAGAAGAAGGCAAAGAAGCAACCAGTCGATGATG
AGGATGTAAAGGAAGTTGAACCGGAACAGATGGAAGTAGATACGCCTAAAAAGAAGAAAA
AGAAAAAGCAGAAAGAAGAGGAAGCTGCCACCGAAGAGGAAAATGAACCAAAATCAGCCA
AGAAGAAAAAGAAAAAGACGAAAGAAATTGATGCAGTGGAAAATACAGAAGTTGAGTTGG
TTTTGAAAAAGAAAAAGAAGAAAAAAGTAGTGGGATAATTGGAAAAGGTGGATAAGATTT
TAAAAGAAAATTTTTATCATGAAACAAATAAAAACACAAATTTTCCGTTTTGTACTTTGA
TATCAATTTTAAATCACTGCCTAAGTTAAAGATTGTGTTGAACTTTGATGGTAACGGGGT
TGTAATACATACTGTAAATAAATGAGTGTTTTTTACACGTAACAGTGGTTATGTGCAAAA
TTGCAAATATTATAAAATTAAAAACTATTAGTAATATTTTCATGCAGTAAGTAACCTACT
TGGGATTGGTGTTCTGTTGTGCTCAGCTAGTAAACGCAATAGTTTTCAGGTTAAATTTGA
TTCAAATTATGCGTGACATCTTGTTAAAACGCTTAAACTAAGATTGGTAGATTCCCTGTG
GACCTTGGGAGCACAAAG
| Pfam |
NOP5_N (IPR012974) - T[7-72] 2.5E-18 |
| SUPERFAMILY |
Nop_dom_sf (IPR036070) - T[163-351] 1.7E-67 |
| SMART |
NOSIC (IPR012976) - T[170-222] 5.1E-31 |
| Gene3D |
Helix_hairpin_bin_sf (IPR029012) - T[171-200] 6.7E-47 - T[256-286] 6.7E-47 |
| Pfam |
Nop_dom (IPR002687) - T[177-351] 9.4E-64 |
| ProSiteProfiles |
Nop_dom (IPR002687) - T[295-419] 19.773 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PRP31_HUMAN | 31.138 % | 81.3 | 1.84E-16 |
| NOP58_HUMAN | 41.36 % | 274 | 2.79E-86 |
| NOP56_HUMAN | 66.571 % | 486 | 3.63E-168 |