- Transcript 'KH2012:KH.L24.2.v2.B...' >
- Transcript 'Moocul.CG.ELv1_2.S11...' >
- Transcript 'KH2012:KH.L170.59.v1...' >
- Transcript 'Phmamm.CG.MTP2014.S5...' >
- Transcript 'KH2012:KH.L8.2.v1.B....'
Transcript Model
Transcript Id
KH2012:KH.L8.2.v1.B.SL3-1
Possible name(s)
NOP56; NOP58; PRPF31
Gene model
Location
KhL8 [222,884 / 225,040]
Amino acid sequence
Length: 471
>KH.L8.2.v1.B.SL3-1
NMAPQLYVLYEHAAGYALFFVKEVEDIGSLLPTVEKAVLDFTLFASTVKLVSFLPFKSGT
NALDNVNAVSEGIVHEDLKVFLSSNIPKLQKGEVLLGINDTRISGTIQEETGIRCTTSDA
VTEILRGLRLHFPNMVKGLTMQGEAKAQLGLGHSYSRAKVKFNVNRSDNMIIQSIALLDQ
LDKDINTFSMRVKEWYSYHFPELVKISSDNFMYCRLVKAIGNRKAMAENIEEQLEEITMD
SAKAQGIISASKMSMGMDVSPIDLINIESFCSRVISLTNYKKGLVEYLHKRMQSVAPNLS
TLIGDVVGARLISHAGSLTNLAKYPASTVQILGAEKALFRALKQKGNTPKYAKKTKSKKK
KRKSEPVDLTEEPEAKKVLTENNQKSAKKKKAKKQPVDDEDVKEVEPEQMEVDTPKKKKK
KKQKEEEAATEEENEPKSAKKKKKKTKEIDAVENTEVELVLKKKKKKKVVG
Nucleotide sequence
Length: 1,874
>KH2012:KH.L8.2.v1.B.SL3-1
ATTGTCATCCAAAAAATATAGAAATTTACTGGGTTTAATTTCGCCAGAAAACTTATAGAA
TATGGCTCCCCAGCTGTATGTGTTATACGAACATGCTGCTGGTTATGCTTTATTCTTCGT
TAAAGAAGTTGAAGATATTGGATCACTCTTACCTACAGTAGAGAAGGCTGTTCTAGACTT
TACATTGTTTGCAAGCACTGTAAAGTTGGTTTCATTTCTTCCATTTAAATCTGGAACAAA
CGCCTTGGACAATGTCAATGCTGTTTCTGAAGGTATCGTTCATGAAGATCTTAAAGTATT
TCTTTCATCAAACATACCAAAGTTGCAGAAAGGTGAAGTTCTTCTTGGAATAAACGACAC
CAGGATTTCTGGAACCATTCAAGAAGAGACTGGAATTCGTTGCACAACAAGCGACGCAGT
GACAGAAATTCTTCGTGGATTGCGTTTGCATTTCCCAAACATGGTCAAAGGCTTGACCAT
GCAAGGGGAAGCTAAGGCACAGCTGGGTTTGGGACACAGCTACTCTCGAGCTAAAGTTAA
GTTCAACGTGAATAGGTCAGACAACATGATCATACAGAGCATTGCATTGTTGGACCAACT
GGATAAAGATATCAACACATTCTCTATGAGGGTGAAGGAGTGGTATTCTTATCACTTCCC
AGAGTTGGTGAAAATATCGAGTGACAACTTCATGTATTGTCGTCTTGTTAAGGCAATTGG
TAATCGTAAAGCTATGGCGGAAAATATTGAAGAACAACTGGAAGAAATTACCATGGATTC
AGCGAAAGCACAGGGTATTATTTCAGCCTCAAAGATGTCAATGGGAATGGATGTTTCTCC
AATTGATTTAATTAACATAGAATCATTTTGTAGCAGAGTCATATCTTTGACCAACTACAA
AAAAGGCCTAGTTGAATATCTGCACAAAAGAATGCAGTCTGTTGCACCGAATCTTTCAAC
GCTGATTGGTGATGTGGTTGGGGCAAGACTGATTTCACATGCTGGAAGTCTGACAAATTT
GGCCAAATATCCAGCTTCTACTGTTCAAATATTGGGTGCAGAAAAAGCCCTATTTAGGGC
ATTGAAACAGAAAGGCAACACACCAAAGTATGCTAAGAAAACAAAGAGCAAAAAGAAGAA
GAGAAAATCGGAACCAGTTGATCTGACAGAAGAGCCAGAAGCAAAGAAGGTTCTTACTGA
AAATAATCAGAAAAGTGCAAAAAAGAAGAAGGCAAAGAAGCAACCAGTCGATGATGAGGA
TGTAAAGGAAGTTGAACCGGAACAGATGGAAGTAGATACGCCTAAAAAGAAGAAAAAGAA
AAAGCAGAAAGAAGAGGAAGCTGCCACCGAAGAGGAAAATGAACCAAAATCAGCCAAGAA
GAAAAAGAAAAAGACGAAAGAAATTGATGCAGTGGAAAATACAGAAGTTGAGTTGGTTTT
GAAAAAGAAAAAGAAGAAAAAAGTAGTGGGATAATTGGAAAAGGTGGATAAGATTTTAAA
AGAAAATTTTTATCATGAAACAAATAAAAACACAAATTTTCCGTTTTGTACTTTGATATC
AATTTTAAATCACTGCCTAAGTTAAAGATTGTGTTGAACTTTGATGGTAACGGGGTTGTA
ATACATACTGTAAATAAATGAGTGTTTTTTACACGTAACAGTGGTTATGTGCAAAATTGC
AAATATTATAAAATTAAAAACTATTAGTAATATTTTCATGCAGTAAGTAACCTACTTGGG
ATTGGTGTTCTGTTGTGCTCAGCTAGTAAACGCAATAGTTTTCAGGTTAAATTTGATTCA
AATTATGCGTGACATCTTGTTAAAACGCTTAAACTAAGATTGGTAGATTCCCTGTGGACC
TTGGGAGCACAAAG
| Pfam |
NOP5_N (IPR012974) - T[7-72] 2.5E-18 |
| SUPERFAMILY |
Nop_dom_sf (IPR036070) - T[163-351] 1.7E-67 |
| SMART |
NOSIC (IPR012976) - T[170-222] 5.1E-31 |
| Gene3D |
Helix_hairpin_bin_sf (IPR029012) - T[171-200] 6.7E-47 - T[256-286] 6.7E-47 |
| Pfam |
Nop_dom (IPR002687) - T[177-351] 9.4E-64 |
| ProSiteProfiles |
Nop_dom (IPR002687) - T[295-419] 19.773 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PRP31_HUMAN | 31.138 % | 81.3 | 1.84E-16 |
| NOP58_HUMAN | 41.36 % | 274 | 2.79E-86 |
| NOP56_HUMAN | 66.571 % | 486 | 3.63E-168 |