- Transcript 'KH2012:KH.C14.52.v1....' >
- Clone 'ciad053h01' >
- Clone 'cicl049m16' >
- Transcript 'KH2012:KH.C9.708.v1....' >
- Transcript 'KH2012:KH.L87.48.v1....'
Transcript Model
Transcript Id
KH2012:KH.L87.48.v1.B.nonSL2-1
Possible name(s)
DDX58; DHX58; IFIH1
Gene model
Location
KhL87 [273,075 / 282,718]
Amino acid sequence
Length: 810
>KH.L87.48.v1.B.nonSL2-1
YFWKMGESVKYFMSHWGPFLKIFLAPRSILNNFPHMEDDVRKQITDEGNKIKQVELFIKY
LEECEEPGILQAFLDALRNSQGTGQWIADVLDGKLDHQLGKCEEYMQDVPQIKKLFILIK
KDLNVIDFEDFTSFFSHHLDTEEKEEIQSVFVKGNSAAGTAFFSIIVRKPPSWLKEFLEE
IEGQHYIHKLHGSLAAALREYFFFYGSIKQLKLRNYQLELAEQALQGNNSLIVAPTVDLF
HTPCSRLEVTKFVTLKDCDFINELGLLIYDECHHAMKGDPYNSIMKVYHDNLTKYNGAKP
LPQVIGMTASPGVGGAKSVQAATQHIKRLLANLNVTTAPVEVIENKKELGKHTTETTCEI
RRIDRKKTQFQENMVTLINKIWENLKIEFEKAENEVKDIDTNLKAKPGTQAFEAWCVQLR
ESSSTLRNDKLSQRLQEYAQHLREYNNSLMIDYDLTSTEACDYVTQFWCNACTTVVPELE
QLHEDYAPKREYHTSPILRKLFEILTAEFVDFPESKCIIFVRTRCIAKALVTCLMEDFYD
LKPKQLTGVGASAGDGGMTRVEQEDTISSFRDGSTKIIVATSVAEEGFDIPACNLVIAYN
YSTNEIGHVQRQGRGRAKESKMFLLAYEGSALIHQEETNIAQLECSREALKQIRNTNSTI
LEQEIKEFQRLLKVERESERSAAQRQIEGAIASNKIWTFLCKKCKKVATTSDKFQHINHQ
HHVVVDAGFIERAEIVQYPAIKHKVFGEQTIIGIVKCKSCRSDWGAYMRHRQQPISVLKI
VNFVLQHEEDRITVKQWKKSPFNVHKEFME
Nucleotide sequence
Length: 3,231
>KH2012:KH.L87.48.v1.B.nonSL2-1
GTGTTACCAGCTCTTATTGTTACAATGCAACAGACGAATGTTTTTTTATTAGTGAAATAA
CGATTTAGGAACACTTGCCAGTACCGAAGATCAAATTAATTACAACAACAAAGAGAAGGG
AATTAGCAACAAAACGACCGCCATTACAAACGTTTTGTTTTGTTAATATTTCTGGAAAAT
GGGAGAAAGTGTTAAATACTTTATGTCCCATTGGGGACCTTTTTTAAAAATATTTCTTGC
ACCTCGTTCAATACTAAACAACTTCCCTCATATGGAAGATGACGTTCGAAAACAAATCAC
TGACGAAGGAAATAAGATAAAACAAGTCGAATTGTTTATAAAATATTTGGAGGAATGTGA
AGAACCTGGAATTTTGCAAGCATTTCTAGATGCATTGAGAAATAGTCAAGGCACAGGACA
GTGGATAGCTGATGTGTTGGATGGTAAGCTGGACCATCAACTTGGAAAATGTGAGGAATA
CATGCAAGATGTTCCACAAATAAAAAAGCTTTTTATTTTGATCAAGAAGGATTTAAATGT
GATAGACTTTGAGGATTTTACTTCTTTTTTCTCACACCATCTGGACACTGAAGAAAAAGA
AGAAATCCAAAGTGTTTTTGTCAAGGGAAACTCAGCAGCAGGAACTGCATTCTTCTCTAT
TATAGTTCGGAAACCTCCTTCATGGTTAAAAGAATTTCTTGAAGAAATAGAGGGACAACA
TTACATTCACAAATTACATGGAAGTCTCGCAGCAGCCCTTAGAGAGTATTTTTTCTTTTA
TGGTTCAATTAAACAACTGAAGCTAAGGAATTACCAATTGGAACTTGCTGAGCAGGCATT
ACAAGGAAACAACTCACTTATTGTTGCACCAACTGTTGATCTGTTTCATACACCTTGTTC
CCGCTTAGAAGTTACCAAGTTTGTAACTTTGAAAGATTGTGACTTCATTAATGAGCTTGG
TCTTCTCATATATGATGAATGTCATCATGCAATGAAAGGGGATCCTTACAACTCCATTAT
GAAAGTTTATCACGATAACTTGACAAAGTACAACGGTGCAAAACCTTTACCACAAGTAAT
TGGAATGACTGCTTCTCCTGGAGTCGGTGGTGCAAAATCTGTTCAAGCAGCAACACAGCA
TATAAAGAGACTATTGGCAAACTTAAATGTAACAACTGCACCAGTGGAGGTTATTGAGAA
CAAAAAGGAGTTGGGAAAACATACAACAGAAACTACATGTGAAATAAGGCGCATTGATCG
GAAAAAAACACAATTTCAGGAAAACATGGTTACACTCATAAATAAAATATGGGAAAACTT
GAAAATAGAATTCGAAAAAGCTGAAAATGAAGTAAAAGATATAGACACGAACCTGAAAGC
AAAACCTGGAACACAAGCATTTGAGGCTTGGTGTGTCCAGTTAAGGGAATCAAGCAGTAC
ATTAAGAAATGACAAATTAAGTCAACGACTTCAGGAATATGCTCAACACCTACGTGAATA
TAACAACTCATTGATGATTGATTATGATCTAACCAGCACAGAAGCTTGTGATTATGTAAC
TCAGTTTTGGTGTAATGCATGCACCACAGTTGTACCAGAATTAGAACAATTGCATGAAGA
TTATGCACCTAAGAGAGAATATCATACCAGCCCCATATTGAGAAAATTGTTTGAAATTCT
CACCGCTGAGTTTGTCGACTTCCCAGAATCTAAGTGTATTATATTTGTACGCACCAGGTG
TATTGCCAAGGCTTTGGTAACTTGTCTTATGGAAGATTTTTATGATTTAAAACCAAAGCA
ACTGACTGGAGTGGGAGCTTCTGCTGGAGATGGAGGAATGACCAGGGTTGAACAAGAAGA
CACCATTTCATCTTTCAGAGATGGTTCGACCAAAATAATTGTTGCAACTTCAGTTGCAGA
GGAAGGATTTGATATTCCAGCTTGTAACTTGGTGATTGCATACAACTACTCTACCAATGA
AATTGGTCATGTACAAAGGCAAGGTAGAGGTCGTGCAAAAGAAAGTAAAATGTTCCTTCT
CGCTTATGAAGGCAGTGCACTAATTCATCAGGAAGAAACTAACATAGCTCAACTAGAGTG
TTCTCGTGAAGCACTAAAACAAATCAGAAATACCAATTCAACCATTCTTGAACAAGAAAT
TAAGGAATTTCAAAGACTTTTAAAAGTTGAGAGAGAATCCGAAAGATCAGCAGCTCAACG
TCAAATTGAGGGCGCAATCGCATCTAACAAGATATGGACATTCTTATGTAAAAAGTGCAA
AAAAGTTGCCACCACTTCTGATAAATTTCAGCATATTAATCATCAGCACCATGTTGTGGT
TGATGCGGGCTTCATAGAGAGAGCAGAGATAGTTCAATATCCAGCTATAAAACATAAAGT
TTTTGGAGAACAAACAATTATTGGAATAGTGAAGTGTAAAAGCTGCAGGTCTGATTGGGG
AGCATATATGAGACACAGACAACAGCCTATCTCTGTTCTTAAGATTGTCAACTTCGTGTT
ACAACATGAAGAAGATAGGATTACTGTTAAGCAATGGAAAAAATCTCCTTTCAATGTTCA
TAAAGAGTTCATGGAATGAATTACAAGTTCCTGTTTTACATAGTAGTTTTATTTTTATAA
TCGAAATGCTTTGGCAGGGTATTATTTTTTTAAGCCACTTTGGAGCAATTGCCTTTACAT
TACGTATCTTTAATATCTGTATAATAACATGTACATAACACTTTAACAGAGTATATATAT
ATTTTATGATATGTAATATTAAATTTGTTGTTTTATGATTGTACAATGGTGTGTTGTAAT
ACTTCTGCACTTATCCATTAAGCCGATTAGGAGTTGTAAATATAAATATTTATCATCATT
TCTGTCCCTATGATTCTTCCTTCCAACTAAATGTAAATATGATTTTAACCATAAACGTGT
TTAATCGTTGAGTCGCTTTATCTGTCGTTTTGACGGGATATCCTGTCCTTTAGTTTTACA
GCAAACGTTACTACTATATAACTTTATCATCACGTTGAAGACAACTAACATATGTCTTTT
TATTTGTTTCTAATTAATAAAGTGGATAAATGAGTAGTACTAATAATGTATTTATTGTGT
ATAAATAAATGTAACTTATTTGTCTTCTTGTAGCAGGGACAACTACAGTCCTGTCCTTAT
AACACGGGTGTTTTCGTGCGCACTTACGAGTTAGCACGTATGTAACTGTGT
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[251-329] 8.145 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[261-327] 8.99E-30 - T[497-630] 8.99E-30 |
| CDD |
Helicase_C (IPR001650) - T[492-621] 3.59914E-13 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[497-673] 14.159 |
| Pfam |
Helicase_C (IPR001650) - T[513-617] 1.3E-17 |
| SMART |
Helicase_C (IPR001650) - T[528-618] 9.0E-16 |
| ProSiteProfiles |
RLR_CTR (IPR021673) - T[683-810] 29.835 |
| Gene3D |
RLR_C_sf (IPR038557) - T[690-810] 2.9E-28 |
| Pfam |
RLR_CTR (IPR021673) - T[698-805] 8.9E-23 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DHX58_HUMAN | 30.054 % | 229 | 4.53E-65 |
| DDX58_HUMAN | 28.401 % | 211 | 1.93E-57 |
| IFIH1_HUMAN | 30.252 % | 208 | 5.69E-56 |