- Clone 'cien34829' >
- Clone 'mae16h12' >
- Transcript 'KH2012:KH.L87.8.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.L87.8.v1.A.SL1-1
Possible name(s)
CSTF2T; EIF4B; EIF4H
Gene model
Location
KhL87 [460,065 / 465,429]
Amino acid sequence
Length: 246
>KH.L87.8.v1.A.SL1-1
FMRFCDKLIMAYNDRGNYGQSYGGRGGYRSRGNQRQQTELPSEPPFTCFVGNLPTQTVQG
DIDLIFKDLSIKNVRMVRDRETDKFRGYCYVEFEHLESLKEALEFNGAQFEDQCLRVNVA
EQKRGGGRGGGRGGRGGHGGGGRGQIEFSEGKETKILNNTAAVVVVAGVTTGDVGVGGTI
METKNRTEGTTVGEATATNETLVAQITTVVITEGVETETMEGIGTKTGRLNKKINLPLQT
QVIALV
Nucleotide sequence
Length: 1,951
>KH2012:KH.L87.8.v1.A.SL1-1
TTTATGCGATTTTGTGATAAACTGATTATGGCATACAATGATAGGGGGAATTACGGGCAA
AGTTATGGTGGCAGAGGAGGGTACAGATCTAGAGGCAACCAACGACAACAAACAGAATTA
CCAAGCGAACCCCCGTTCACATGTTTTGTGGGAAACCTTCCAACACAAACAGTGCAAGGA
GACATCGATCTCATTTTCAAAGATTTAAGCATAAAGAATGTCCGCATGGTGAGAGACAGA
GAAACAGACAAGTTTCGAGGTTACTGTTACGTTGAATTTGAGCATTTGGAATCCCTGAAA
GAAGCATTAGAATTTAACGGAGCTCAATTTGAAGATCAGTGTCTTCGTGTGAATGTAGCG
GAGCAGAAGAGAGGAGGAGGAAGGGGGGGAGGAAGAGGAGGGAGAGGAGGACATGGGGGT
GGGGGAAGAGGTCAGATCGAGTTTAGTGAAGGCAAAGAAACCAAGATTTTGAACAATACC
GCGGCGGTGGTGGTGGTGGCGGGGGTTACAACCGGGGACGTGGGGGTCGGGGGTACAATA
ATGGAAACCAAGAATCGTACGGAAGGTACGACCGTGGGGGAAGCTACGGCAACGAACGAA
ACTTTGGTGGCTCAGATTACAACAGTGGTTATAACAGAGGGGGTCGAGACCGAGACCATG
GAAGGGATCGGTACCAAAACTGGGAGGCTGAACAAAAAGATCAACCTACCACTGCAGACA
CAAGTAATCGCCCTCGTCTGAAGCTCCAGAAACGTACAGTGGACAAACCAGTAAATGCCG
TAGCGAATCCAAATTCCGCAATTTTCGGCGGGGCTCGACCACGGGAACAAATTATAGCTG
AAAAAGGTTTGGACGACTTGGATAAACAAGTTGAAGAGAAGCTGAATATTAGGGAACGCA
AAGTTGAGGAATTATCGGCAGAATAAGGGGAAATAACAGCCAGAGACAAATGATAAAAGA
ACTTGTTTTCCGAACACAATTTATCATGTTTCGTGGCAGTTATGTGTAAGTGAAGGAACA
GTCGTCAGCTGTTACATTATTTTTGCGTTTTACTTGTGATTGGGCCTTACCTGCCATTAT
CTGACCACGCGTTTTACTGCTAATTCATAGGTGCTTGTCCTATCTATATTGTACAGTTGT
TATTATTTGCAGCACCGTCGTTGCATTTCTTGTTTCTGAGTTTAGATAAAGAAGTCACGC
ACAAGAAATATCCGCCAAAACTTTCTTAATATCTGAAAGAGGGAAACTATATAAAGTCGT
TTTATCAAACATTTGGAATTGTTAGGAATAACATGTATCTTGTACGCATGTTCAAATTCC
GTTTATTCAATTAAGCTTTTGGTTTTTTTGATAGTGCACGTATTGTACAACTACAGTGGT
TGTTTAAGTAACAAATGCATGGACCATGTGGATGCTTGGGTTCTAAGCTTGTCAAGTAAT
ATGCTCTGCATCATTGCCATCATTGGACACTTGATACAATTTGCTTTTGGTCGTAGTATA
GTTGAGTGGGGGAAAATGGGACACGTATCCATGCTCTTTTATCATCCCATTTTGAAGAAA
ACAAAATACTAAATAGAATTATCACACTGTATTCTTCCGGCTTTTGTAAACCGTTGTTAA
TTGTACTAAAGGTGTCCCATCTTACCCCACTATACATCATGTTAATTTATTTCTTAGTGT
GACGAAAGCAGTACTACCAATTCTTTAGTGTGATGTCACAACAACTGGTGTCGTATTTTA
AAGTTACGAAACTTGATTTTATCGAATTTAAAATGTTTGTGTTGAAAATCCTTACAGACC
GGTCGAAAATGATTTCACTTTGCTCAAAAGCTTTTACCGTAAAGTGAGTCAAATGTTTTT
TTTTTAAGTTTGAAAAATTGATGGAAAGTATGAAAAAAATAATTCTGTTTTAAAGTACCA
AAAATTGATGGTTAAAGTATTAAGCTGGTGA
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[32-126] 7.1E-24 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[38-146] 7.19E-25 |
| CDD |
eIF4H_RRM (IPR034229) - T[45-120] 1.43128E-45 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[46-122] 14.351 |
| SMART |
RRM_dom (IPR000504) - T[47-118] 4.1E-16 |
| Pfam |
RRM_dom (IPR000504) - T[49-115] 3.6E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| IF4H_HUMAN | 65.517 % | 132 | 5.87E-38 |