- Clone 'man11m10' >
- Transcript 'KH2012:KH.L87.8.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.L87.8.v1.A.SL2-1
Possible name(s)
CSTF2T; EIF4B; EIF4H
Gene model
Location
KhL87 [460,049 / 465,429]
Amino acid sequence
Length: 251
>KH.L87.8.v1.A.SL2-1
FSFSQFMRFCDKLIMAYNDRGNYGQSYGGRGGYRSRGNQRQQTELPSEPPFTCFVGNLPT
QTVQGDIDLIFKDLSIKNVRMVRDRETDKFRGYCYVEFEHLESLKEALEFNGAQFEDQCL
RVNVAEQKRGGGRGGGRGGRGGHGGGGRGQIEFSEGKETKILNNTAAVVVVAGVTTGDVG
VGGTIMETKNRTEGTTVGEATATNETLVAQITTVVITEGVETETMEGIGTKTGRLNKKIN
LPLQTQVIALV
Nucleotide sequence
Length: 1,967
>KH2012:KH.L87.8.v1.A.SL2-1
TTTTTCTTTTTCACAGTTTATGCGATTTTGTGATAAACTGATTATGGCATACAATGATAG
GGGGAATTACGGGCAAAGTTATGGTGGCAGAGGAGGGTACAGATCTAGAGGCAACCAACG
ACAACAAACAGAATTACCAAGCGAACCCCCGTTCACATGTTTTGTGGGAAACCTTCCAAC
ACAAACAGTGCAAGGAGACATCGATCTCATTTTCAAAGATTTAAGCATAAAGAATGTCCG
CATGGTGAGAGACAGAGAAACAGACAAGTTTCGAGGTTACTGTTACGTTGAATTTGAGCA
TTTGGAATCCCTGAAAGAAGCATTAGAATTTAACGGAGCTCAATTTGAAGATCAGTGTCT
TCGTGTGAATGTAGCGGAGCAGAAGAGAGGAGGAGGAAGGGGGGGAGGAAGAGGAGGGAG
AGGAGGACATGGGGGTGGGGGAAGAGGTCAGATCGAGTTTAGTGAAGGCAAAGAAACCAA
GATTTTGAACAATACCGCGGCGGTGGTGGTGGTGGCGGGGGTTACAACCGGGGACGTGGG
GGTCGGGGGTACAATAATGGAAACCAAGAATCGTACGGAAGGTACGACCGTGGGGGAAGC
TACGGCAACGAACGAAACTTTGGTGGCTCAGATTACAACAGTGGTTATAACAGAGGGGGT
CGAGACCGAGACCATGGAAGGGATCGGTACCAAAACTGGGAGGCTGAACAAAAAGATCAA
CCTACCACTGCAGACACAAGTAATCGCCCTCGTCTGAAGCTCCAGAAACGTACAGTGGAC
AAACCAGTAAATGCCGTAGCGAATCCAAATTCCGCAATTTTCGGCGGGGCTCGACCACGG
GAACAAATTATAGCTGAAAAAGGTTTGGACGACTTGGATAAACAAGTTGAAGAGAAGCTG
AATATTAGGGAACGCAAAGTTGAGGAATTATCGGCAGAATAAGGGGAAATAACAGCCAGA
GACAAATGATAAAAGAACTTGTTTTCCGAACACAATTTATCATGTTTCGTGGCAGTTATG
TGTAAGTGAAGGAACAGTCGTCAGCTGTTACATTATTTTTGCGTTTTACTTGTGATTGGG
CCTTACCTGCCATTATCTGACCACGCGTTTTACTGCTAATTCATAGGTGCTTGTCCTATC
TATATTGTACAGTTGTTATTATTTGCAGCACCGTCGTTGCATTTCTTGTTTCTGAGTTTA
GATAAAGAAGTCACGCACAAGAAATATCCGCCAAAACTTTCTTAATATCTGAAAGAGGGA
AACTATATAAAGTCGTTTTATCAAACATTTGGAATTGTTAGGAATAACATGTATCTTGTA
CGCATGTTCAAATTCCGTTTATTCAATTAAGCTTTTGGTTTTTTTGATAGTGCACGTATT
GTACAACTACAGTGGTTGTTTAAGTAACAAATGCATGGACCATGTGGATGCTTGGGTTCT
AAGCTTGTCAAGTAATATGCTCTGCATCATTGCCATCATTGGACACTTGATACAATTTGC
TTTTGGTCGTAGTATAGTTGAGTGGGGGAAAATGGGACACGTATCCATGCTCTTTTATCA
TCCCATTTTGAAGAAAACAAAATACTAAATAGAATTATCACACTGTATTCTTCCGGCTTT
TGTAAACCGTTGTTAATTGTACTAAAGGTGTCCCATCTTACCCCACTATACATCATGTTA
ATTTATTTCTTAGTGTGACGAAAGCAGTACTACCAATTCTTTAGTGTGATGTCACAACAA
CTGGTGTCGTATTTTAAAGTTACGAAACTTGATTTTATCGAATTTAAAATGTTTGTGTTG
AAAATCCTTACAGACCGGTCGAAAATGATTTCACTTTGCTCAAAAGCTTTTACCGTAAAG
TGAGTCAAATGTTTTTTTTTTAAGTTTGAAAAATTGATGGAAAGTATGAAAAAAATAATT
CTGTTTTAAAGTACCAAAAATTGATGGTTAAAGTATTAAGCTGGTGA
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[37-131] 7.4E-24 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[42-151] 9.77E-25 |
| CDD |
eIF4H_RRM (IPR034229) - T[50-125] 2.36313E-45 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[51-127] 14.351 |
| SMART |
RRM_dom (IPR000504) - T[52-123] 4.1E-16 |
| Pfam |
RRM_dom (IPR000504) - T[54-120] 3.8E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| IF4H_HUMAN | 63.333 % | 132 | 5.8E-38 |