Aniseed - Transcript Card

Transcript 'KH2012:KH.L9.10.v1.A...'

Transcript Model

Transcript Id

KH2012:KH.L9.10.v1.A.nonSL1-1

Possible name(s)

ATP6V1C1; ATP6V1C2

Gene model

KH2012:KH.L9.10

Location

KhL9 [168,802 / 171,742]

Sequences

Amino acid sequence

Length: 399

>KH.L9.10.v1.A.nonSL1-1
DKHRHHKNIVVKELFCRLLFEVEMSEYWLISAPGDKTPQQTWEKLNRATQQMSNNHKFHI
PDLKVGTLDALIGLSDDLGKLDIFAEGLLNTYSNKWLKTKLNPNINNDKHFXATLETFMH
RFQWNLAKYPVKLPLKSLAEISSKVVTQVDTDLRTKSQAYNNLKSNLQNMERKATGSLLL
RNLREIVKKEDFIHDSEYLQTLLVAVPVQTTEEWEKNYETLTDYVAPRSSRLLYRDEEYG
LYGVTIFKKVYEEFKTKCGRHKFFLRDFQYNERDMASDKDQLTKLTSDKKKMLGPLLRWL
KVNFSEVFTAWMHVKALRVFVESVLRYGLPVNFQATVVQPQKKQSKRLQETLNKLYVGLD
STGLAAVNEDDFLPGLTLGTQEYHPYVFYKVVLDFESQH

Nucleotide sequence

Length: 1,469

>KH2012:KH.L9.10.v1.A.nonSL1-1
GATAAACATAGACATCATAAAAACATTGTTGTTAAAGAATTATTTTGTCGTCTGTTATTT
GAGGTTGAGATGTCAGAATATTGGTTGATAAGCGCGCCAGGGGATAAAACACCCCAGCAA
ACATGGGAGAAATTAAACAGGGCGACGCAACAAATGTCGAATAATCATAAATTTCACATC
CCAGACCTCAAAGTTGGGACGTTGGACGCCTTAATCGGTTTGTCGGACGATCTGGGGAAA
TTAGATATTTTTGCTGAAGGGTTGTTAAATACCTATAGTAACAAATGGTTAAAGACAAAA
CTTAACCCCAACATTAACAACGATAAACATTTCAGNGCCACCCTTGAAACCTTCATGCAT
CGCTTTCAATGGAACTTGGCAAAATACCCCGTCAAGTTACCTCTCAAAAGTTTGGCCGAA
ATTAGTTCAAAAGTTGTCACGCAAGTCGACACAGATCTTCGCACAAAGTCGCAAGCTTAC
AATAATCTAAAATCAAATCTACAAAACATGGAGCGGAAAGCAACTGGGAGTTTGCTGCTT
CGGAACTTGAGGGAAATCGTAAAAAAAGAAGATTTCATTCACGATTCGGAGTATTTGCAA
ACATTGCTTGTTGCTGTGCCGGTACAAACAACCGAAGAATGGGAAAAGAATTACGAAACT
TTAACAGATTACGTCGCACCTCGTTCGTCAAGGTTACTTTATCGGGACGAGGAGTATGGA
CTTTATGGCGTCACAATATTCAAGAAAGTTTATGAAGAATTCAAAACTAAATGCGGACGG
CACAAATTTTTCCTCCGTGACTTTCAATACAACGAGCGCGACATGGCGTCTGATAAAGAT
CAACTCACTAAATTGACTTCGGATAAAAAGAAGATGTTGGGCCCCCTACTACGATGGTTG
AAAGTCAACTTCAGCGAAGTATTCACCGCATGGATGCACGTGAAGGCACTCCGAGTGTTC
GTGGAATCTGTGTTAAGGTACGGACTTCCTGTCAACTTCCAAGCAACTGTTGTCCAACCG
CAGAAGAAACAATCCAAAAGATTGCAAGAAACATTGAATAAGTTGTATGTTGGCCTGGAT
AGCACGGGACTCGCTGCTGTTAATGAGGACGATTTTCTTCCCGGTTTAACCCTCGGCACC
CAGGAATATCATCCCTACGTGTTTTACAAGGTCGTCCTCGACTTTGAATCGCAACATTAA
TATGATTTCTATGTAAATTGTTGTGCAATACCAATGTATCGGAATAAATCGTGTATTTTG
TCTTTGAAACATAAACTTGAACTTTTGACCTCCGAGCCTATTATGACATCACATATCCAT
CGGTTGTTCTTCGTCTTCGCGTGGTTGACCGCTCACAGGGGGGACCAATCCCGGGAGTTC
CCCCTGGAAAATGTTATTGATTTATTTGTTGAATTGTTAAAGAAATGTAAATGGCACAAA
GTTACATCTGTGGTATAAAGGTGCCATTG

InterProScan

SUPERFAMILY	Vac_ATP_synth_c_sf (IPR036132) - T[24-391] 2.75E-126
PANTHER	ATPase_V1-cplx_csu (IPR004907) - T[24-395] 2.0E-151
CDD	ATPase_V1-cplx_csu (IPR004907) - T[27-391] 2.91406E-163
Pfam	ATPase_V1-cplx_csu (IPR004907) - T[27-387] 2.9E-139

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
VATC1_HUMAN	55.172 %	420	2.48E-146
VATC2_HUMAN	45.154 %	355	2.11E-120