Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.L9.10.v1.A.nonSL20-1

Possible name(s)

ATP6V1C1; ATP6V1C2

Gene model

KH2012:KH.L9.10

Location

KhL9 [168,802 / 171,714]

Sequences

Amino acid sequence

Length: 389

>KH.L9.10.v1.A.nonSL20-1
VKELFCRLLFEVEMSEYWLISAPGDKTPQQTWEKLNRATQQMSNNHKFHIPDLKVGTLDA
LIGLSDDLGKLDIFAEGLLNTYSNKWLKTKLNPNINNDKHFXATLETFMHRFQWNLAKYP
VKLPLKSLAEISSKVVTQVDTDLRTKSQAYNNLKSNLQNMERKATGSLLLRNLREIVKKE
DFIHDSEYLQTLLVAVPVQTTEEWEKNYETLTDYVAPRSSRLLYRDEEYGLYGVTIFKKV
YEEFKTKCGRHKFFLRDFQYNERDMASDKDQLTKLTSDKKKMLGPLLRWLKVNFSEVFTA
WMHVKALRVFVESVLRYGLPVNFQATVVQPQKKQSKRLQETLNKLYVGLDSTGLAAVNED
DFLPGLTLGTQEYHPYVFYKVVLDFESQH

Nucleotide sequence

Length: 1,441

>KH2012:KH.L9.10.v1.A.nonSL20-1
TTGTTAAAGAATTATTTTGTCGTCTGTTATTTGAGGTTGAGATGTCAGAATATTGGTTGA
TAAGCGCGCCAGGGGATAAAACACCCCAGCAAACATGGGAGAAATTAAACAGGGCGACGC
AACAAATGTCGAATAATCATAAATTTCACATCCCAGACCTCAAAGTTGGGACGTTGGACG
CCTTAATCGGTTTGTCGGACGATCTGGGGAAATTAGATATTTTTGCTGAAGGGTTGTTAA
ATACCTATAGTAACAAATGGTTAAAGACAAAACTTAACCCCAACATTAACAACGATAAAC
ATTTCAGNGCCACCCTTGAAACCTTCATGCATCGCTTTCAATGGAACTTGGCAAAATACC
CCGTCAAGTTACCTCTCAAAAGTTTGGCCGAAATTAGTTCAAAAGTTGTCACGCAAGTCG
ACACAGATCTTCGCACAAAGTCGCAAGCTTACAATAATCTAAAATCAAATCTACAAAACA
TGGAGCGGAAAGCAACTGGGAGTTTGCTGCTTCGGAACTTGAGGGAAATCGTAAAAAAAG
AAGATTTCATTCACGATTCGGAGTATTTGCAAACATTGCTTGTTGCTGTGCCGGTACAAA
CAACCGAAGAATGGGAAAAGAATTACGAAACTTTAACAGATTACGTCGCACCTCGTTCGT
CAAGGTTACTTTATCGGGACGAGGAGTATGGACTTTATGGCGTCACAATATTCAAGAAAG
TTTATGAAGAATTCAAAACTAAATGCGGACGGCACAAATTTTTCCTCCGTGACTTTCAAT
ACAACGAGCGCGACATGGCGTCTGATAAAGATCAACTCACTAAATTGACTTCGGATAAAA
AGAAGATGTTGGGCCCCCTACTACGATGGTTGAAAGTCAACTTCAGCGAAGTATTCACCG
CATGGATGCACGTGAAGGCACTCCGAGTGTTCGTGGAATCTGTGTTAAGGTACGGACTTC
CTGTCAACTTCCAAGCAACTGTTGTCCAACCGCAGAAGAAACAATCCAAAAGATTGCAAG
AAACATTGAATAAGTTGTATGTTGGCCTGGATAGCACGGGACTCGCTGCTGTTAATGAGG
ACGATTTTCTTCCCGGTTTAACCCTCGGCACCCAGGAATATCATCCCTACGTGTTTTACA
AGGTCGTCCTCGACTTTGAATCGCAACATTAATATGATTTCTATGTAAATTGTTGTGCAA
TACCAATGTATCGGAATAAATCGTGTATTTTGTCTTTGAAACATAAACTTGAACTTTTGA
CCTCCGAGCCTATTATGACATCACATATCCATCGGTTGTTCTTCGTCTTCGCGTGGTTGA
CCGCTCACAGGGGGGACCAATCCCGGGAGTTCCCCCTGGAAAATGTTATTGATTTATTTG
TTGAATTGTTAAAGAAATGTAAATGGCACAAAGTTACATCTGTGGTATAAAGGTGCCATT
G

InterProScan

SUPERFAMILY	Vac_ATP_synth_c_sf (IPR036132) - T[14-381] 2.48E-126
PANTHER	ATPase_V1-cplx_csu (IPR004907) - T[14-385] 1.8E-151
CDD	ATPase_V1-cplx_csu (IPR004907) - T[17-381] 2.2841E-163
Pfam	ATPase_V1-cplx_csu (IPR004907) - T[17-377] 2.6E-139

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
VATC1_HUMAN	55.172 %	420	1.16E-146
VATC2_HUMAN	45.154 %	355	1.32E-120